RNA id: AMCG00014218


Basic Information

Item Value
RNA id AMCG00014218
length 201
RNA type mRNA
GC content 0.47
exon number 2
gene id AMCG00014218
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 5079509 ~ 5079783 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTCTTCTTTGCAGATATCCACGATGAGAATGGCTTGAAGCCAGTGATGGTGTACATTCATGGTGGCTCCTACATGGAGGGAACAGGAAACATGATCGACGGGAGCATCCTGGCCAGCTATGGCAACGTCATCGTCATCACTCTCAACTACAGACTTGGGGTTTTAGGACACCAACTCTTAATGTGGAATgagaaataa

Function

GO:

id name namespace
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds molecular_function
GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU85603 lncRNA upstream 222279 4857029 ~ 4857230 (+) True G68509
TU85589 lncRNA upstream 293908 4785326 ~ 4785601 (+) True G68497
TU85563 lncRNA upstream 431296 4647710 ~ 4648213 (+) True G68473
TU85517 lncRNA upstream 491081 4584474 ~ 4588428 (+) False G68434
TU85636 lncRNA downstream 371505 5451288 ~ 5451521 (+) True G68538
TU85659 lncRNA downstream 577467 5657250 ~ 5704009 (+) True G68559
TU85700 lncRNA downstream 699595 5779378 ~ 5782386 (+) True G68589
TU85751 lncRNA downstream 817287 5897070 ~ 5956185 (+) True G68623
TU85765 lncRNA downstream 932899 6012682 ~ 6013059 (+) True G68635
AMCG00014217 mRNA upstream 17237 5061832 ~ 5062272 (+) True AMCG00014217
AMCG00014216 mRNA upstream 121260 4951330 ~ 4958249 (+) True AMCG00014216
AMCG00014214 mRNA upstream 228076 4837723 ~ 4851433 (+) True AMCG00014214
AMCG00014213 mRNA upstream 333507 4723654 ~ 4746002 (+) True AMCG00014213
AMCG00014208 mRNA upstream 496300 4568669 ~ 4583209 (+) True AMCG00014208
AMCG00014220 mRNA downstream 34867 5114650 ~ 5118152 (+) True AMCG00014220
AMCG00014219 mRNA downstream 49388 5129171 ~ 5130645 (+) True AMCG00014219
AMCG00014221 mRNA downstream 428241 5508024 ~ 5550098 (+) True AMCG00014221
AMCG00014222 mRNA downstream 515672 5595455 ~ 5607754 (+) True AMCG00014222
AMCG00014223 mRNA downstream 527990 5607773 ~ 5643489 (+) True AMCG00014223
TU85565 other upstream 427545 4649200 ~ 4651964 (+) True G68475
TU85567 other upstream 427545 4649200 ~ 4651964 (+) False G68475
TU84896 other upstream 2369180 2706840 ~ 2710329 (+) False AMCG00014146
TU86015 other downstream 2266412 7346195 ~ 7349467 (+) True G68830
TU86046 other downstream 2333857 7413640 ~ 7416594 (+) True G68848
TU86705 other downstream 4923275 10003058 ~ 10008648 (+) True G69406
TU87778 other downstream 9257075 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 10595848 15675631 ~ 15679788 (+) True AMCG00014490

Expression Profile