RNA id: AMCG00014263


Basic Information

Item Value
RNA id AMCG00014263
length 819
RNA type mRNA
GC content 0.69
exon number 3
gene id AMCG00014263
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 7040731 ~ 7042716 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCGGGGCTGTCCGAGAGGCAGAAGGCGGGCTGCACGGAGATCCTCCAGAGCCTCGCCGAGCCGGACCTGCTGGCGCTGAAGGACACCGTCACCAACCGCATGATCACCGTGGAGAGCAGCCAAGAGGCCCTCCATGCCATCCTGGCCTACAGCCAGAGCGCCGAGGAGCTGCTGCGGCGCAAGAAGGTTCACCGCGACTTCATCTTCCGCTACCTGGCCAAGGAGGGCGTCGCCCCCAAGCCGAGCGGCCGGGCCGTGGAGGCGGAGGGCAGGGCGGAGACGGCGCCGGGCCGGGGGGAGCAGGCCGCCGAGTGCCAGGCGCTGGGGGACCAGTTCTGCCAGTGGTTCTTCCAGCTTCTGAACTCTCAGAACCCCGCGCTGGGGCAGACGCGGCAGGACTGGGGGCCGCAGCACTTCTGGGACGACGCGCGGCTGCAGTTCTGCTACAGCACGGCCgagcagcagctggaggagTACCGGGGCGCGGAGCTGGTGAGCCTGCGCCTGCTGGCCTTGGCCCGGGACGAGCAGCTGTTCCTCAGCCCCAACCTGGACCCCCGCGGTCTGAAGTGCGTGTCCTCGGCGCACgggctggtggtggtggcggTGGCCGGGACGATCCACCGCGAGCGAAAGTGCCTGGGGGTCTTCGAGCAGGTGTTCGGCCTGATCCGGACCCCCACCGGCCCCAACAGCTGGAAGATCAAATTCCTGAACTTGAAAATCAGGGGGCAGAGCGCGCTGGAGGGCGGGGAGCCGGTACCAGCGCCGGCGGTGACCTACGAGCCCAGCGAGCTGCGGCTCTTCTGTGGTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU85931 lncRNA downstream 49864 6990603 ~ 6990867 (-) True G68757
TU85891 lncRNA downstream 360443 6680025 ~ 6680288 (-) True G68724
TU85889 lncRNA downstream 506030 6534480 ~ 6534701 (-) True G68722
TU85829 lncRNA downstream 932373 6107039 ~ 6108358 (-) False AMCG00014241
TU85837 lncRNA downstream 964821 6073171 ~ 6075910 (-) False AMCG00014241
TU85943 lncRNA upstream 1409 7044125 ~ 7045812 (-) True G68767
TU85949 lncRNA upstream 11215 7053931 ~ 7054306 (-) True G68773
TU85950 lncRNA upstream 12061 7054777 ~ 7058319 (-) True G68774
TU86010 lncRNA upstream 245347 7288063 ~ 7288335 (-) True G68826
TU86011 lncRNA upstream 246220 7288936 ~ 7289437 (-) True G68827
AMCG00014258 mRNA downstream 152641 6887026 ~ 6888090 (-) True AMCG00014258
AMCG00014257 mRNA downstream 180189 6814181 ~ 6860542 (-) True AMCG00014257
AMCG00014256 mRNA downstream 285098 6752859 ~ 6755633 (-) True AMCG00014256
AMCG00014254 mRNA downstream 301464 6718319 ~ 6739267 (-) True AMCG00014254
AMCG00014255 mRNA downstream 322799 6710219 ~ 6717932 (-) True AMCG00014255
AMCG00014264 mRNA upstream 19005 7061721 ~ 7061978 (-) True AMCG00014264
AMCG00014262 mRNA upstream 19346 7062062 ~ 7070724 (-) True AMCG00014262
AMCG00014265 mRNA upstream 34323 7077039 ~ 7093313 (-) True AMCG00014265
AMCG00014268 mRNA upstream 197568 7240284 ~ 7254356 (-) True AMCG00014268
AMCG00014269 mRNA upstream 304736 7347452 ~ 7365740 (-) True AMCG00014269
TU85055 other downstream 4211587 2825562 ~ 2829144 (-) True G68088
TU84998 other downstream 4396824 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 4498034 2540317 ~ 2542697 (-) False AMCG00014134
TU84738 other downstream 5122549 1916727 ~ 1918182 (-) True G67843
TU84714 other downstream 5138116 1900640 ~ 1902615 (-) True G67832
TU86038 other upstream 335372 7378088 ~ 7380780 (-) True AMCG00014271
TU86071 other upstream 374882 7417598 ~ 7423291 (-) False AMCG00014278
TU86293 other upstream 1094615 8137331 ~ 8139126 (-) False AMCG00014297
TU86302 other upstream 1113513 8156229 ~ 8158590 (-) True AMCG00014298
TU86412 other upstream 1340569 8383285 ~ 8384224 (-) True G69156

Expression Profile