RNA id: AMCG00014297


Basic Information

Item Value
RNA id AMCG00014297
length 630
RNA type mRNA
GC content 0.50
exon number 5
gene id AMCG00014297
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 8134903 ~ 8139126 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCATCTCCTGGAAGCGGCAAGTATGAGGACTGGATGTCTCAGCTGCCTGAACAACTCTGGGACATGGCTCTGTACACCCTCGCCATCCCAGGAAGTCATGATGCTTTGAGTTACTGTTTGGATATGGAGTCTCCCCTGATCAGGTCTGAATCTGCAGTATTGAAGAGCATGGACAAGGTCTTCCCATGCATCACCCGGCCAGTTATTTATAAATGGGCAACAACGCAGGAGAAGAACATTGTGGAACAGCTGACAGAAGGGATTCGCTATTTCGACCTGAGAATTGCTCACAAACCACAGGACTCTTCCGATGATCTGTACTACACTCACGTGGTCTACACCATTCGGACAGTCAGGCCCACTGAACCAAACACACTGGCCATATCAGCACTGAAAGAGCACGGCTTGGATGATCTGAGAAGCCGAATTGAAGAAGCCATCCTGAAAACCACGGGGAAGAAAATTCTGACAATTAAGGTGGATCTCAACAGCGCTCAGTTAAGCTGGCTGTACAAGGAGGCCACGGTGCAGGAGGTGGTGGTTCTGCCAGAAGAAGGAGCCGCTGACGTCAAGGTCATTATGAGCAATGCATCGTGGGGGCGATACAGGAAGCTATTCCAGTACTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86202 lncRNA downstream 260864 7874153 ~ 7874358 (-) True G68981
TU86117 lncRNA downstream 508847 7625985 ~ 7626375 (-) True G68905
TU86087 lncRNA downstream 669560 7465409 ~ 7465662 (-) True G68875
TU86086 lncRNA downstream 675333 7455978 ~ 7459889 (-) True G68874
TU86077 lncRNA downstream 694050 7440500 ~ 7441172 (-) True G68867
TU86331 lncRNA upstream 87706 8226494 ~ 8250561 (-) True G69086
TU86493 lncRNA upstream 751768 8890556 ~ 8890839 (-) True G69233
TU86513 lncRNA upstream 859638 8998426 ~ 8998626 (-) True G69250
TU86641 lncRNA upstream 1211000 9349788 ~ 9355238 (-) True G69352
TU86667 lncRNA upstream 1451036 9589824 ~ 9590081 (-) True G69372
AMCG00014291 mRNA downstream 75204 8020985 ~ 8060018 (-) True AMCG00014291
AMCG00014286 mRNA downstream 352220 7752906 ~ 7783002 (-) True AMCG00014286
AMCG00014287 mRNA downstream 383357 7731014 ~ 7751865 (-) True AMCG00014287
AMCG00014284 mRNA downstream 459964 7668553 ~ 7675258 (-) True AMCG00014284
AMCG00014280 mRNA downstream 555122 7569311 ~ 7580100 (-) True AMCG00014280
AMCG00014296 mRNA upstream 3401 8142189 ~ 8147008 (-) True AMCG00014296
AMCG00014295 mRNA upstream 9599 8148387 ~ 8155403 (-) True AMCG00014295
AMCG00014298 mRNA upstream 17144 8155932 ~ 8158488 (-) False AMCG00014298
AMCG00014300 mRNA upstream 27454 8166242 ~ 8186240 (-) True AMCG00014300
AMCG00014301 mRNA upstream 50235 8189023 ~ 8197625 (-) True AMCG00014301
TU86071 other downstream 711931 7417598 ~ 7423291 (-) False AMCG00014278
TU86038 other downstream 754442 7378088 ~ 7380780 (-) True AMCG00014271
TU85055 other downstream 5306078 2825562 ~ 2829144 (-) True G68088
TU84998 other downstream 5491315 2641059 ~ 2643907 (-) False AMCG00014144
TU84851 other downstream 5592525 2540317 ~ 2542697 (-) False AMCG00014134
TU86302 other upstream 17441 8156229 ~ 8158590 (-) True AMCG00014298
TU86412 other upstream 244497 8383285 ~ 8384224 (-) True G69156
TU86630 other upstream 1171663 9310451 ~ 9317167 (-) True AMCG00014328
TU86854 other upstream 2657928 10796716 ~ 10798147 (-) True G69537
TU87063 other upstream 3521233 11660021 ~ 11662493 (-) False AMCG00014374

Expression Profile