RNA id: AMCG00014361



Basic Information


Item Value
RNA id AMCG00014361
length 843
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00014361
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11125399 ~ 11129360 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCTGAGCCCTGCTAACGGGGACCCGCTCCACGTTGCGAACTATGTGGAGGAGTATTTGGACTTGGTCGAGTCGCTGCCTTTCGACCTCCAGAGAAACGTGTCTTTAATGAGGGAAATCGACGCGAAATACCAAGAGATTCTGAAGGAACTGGATGAGATCTACGAGAAGCACAAAAAGGAGGCGGACCCGGTGCAGAAGAAGAGGTTGTTGCACTGCATCCAGAGAGCACTGATCCGCAGCCAAGAGCTCGGTGATGAGAAGATCCAGATCGTCAGCCAGATGGTGGAGCTTGTCGAGAACCGGAGCAGGCAAGTGGAGAGCCATGTGGAACTCTTCGATGCCTGCCAAGAGCCCAATGAGGGCTTGGTCACTCCAGGCAAGACTAGCCAGGAGAAAACTAGAAATGAGTCCACGGGCACCAACGAAAAGCACAGCAACAAGCGGTCCAGGCGGCAGAAGAACAACGAGAACCGAGAGAACTCCAACAACAACCTGGACCATGGAGATGAAATCAGCTCCGGGACACCCAAGGAGAAGAAGGCTAAGACTTCGAAGAAGAAGAAGCGGTCAAAAGCCAAAGCCGAGAGGGAGGCCTCTCCTGCAGACCTGCCCATTGATCCCAATGAGCCCACATATTGCCTGTGCAACCAGGTATCGTACGGAGAGATGATCGGCTGCGACAACGACGAATGCCCCATCGAATGGTTTCACTTCTCTTGCGTTGGACTCAATCACAAGCCCAAGGGCAAATGGTACTGCCCCAAATGCAGGGGAGAGAATGAGAAAACCATGGACAAAGCTCTTGAGAAATCCAAAAAGGAAAGGGCATACAATAGGTAG

Function


GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K19197 ING1; inhibitor of growth protein 1

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86875 lncRNA upstream 163470 10959326 ~ 10961929 (+) True G69556
TU86857 lncRNA upstream 287169 10837204 ~ 10838230 (+) True G69540
TU86811 lncRNA upstream 632003 10493147 ~ 10493396 (+) True G69499
TU86759 lncRNA upstream 901364 10223671 ~ 10224035 (+) True G69457
TU86745 lncRNA upstream 973486 10147979 ~ 10151913 (+) True AMCG00014345
TU86944 lncRNA downstream 91710 11221070 ~ 11221274 (+) True G69610
TU87041 lncRNA downstream 511723 11641083 ~ 11641452 (+) True G69681
TU87100 lncRNA downstream 589958 11719318 ~ 11722767 (+) True G69722
TU87118 lncRNA downstream 654505 11783865 ~ 11784083 (+) True G69739
TU87160 lncRNA downstream 1470744 12600104 ~ 12600313 (+) True G69778
AMCG00014363 mRNA upstream 19549 11097567 ~ 11105850 (+) True AMCG00014363
AMCG00014362 mRNA upstream 38797 11061595 ~ 11086602 (+) True AMCG00014362
AMCG00014355 mRNA upstream 324089 10766636 ~ 10801310 (+) True AMCG00014355
AMCG00014356 mRNA upstream 371252 10721084 ~ 10754147 (+) True AMCG00014356
AMCG00014357 mRNA upstream 453661 10665393 ~ 10671738 (+) True AMCG00014357
AMCG00014369 mRNA downstream 48601 11177961 ~ 11220774 (+) True AMCG00014369
AMCG00014370 mRNA downstream 263029 11392389 ~ 11393405 (+) True AMCG00014370
AMCG00014371 mRNA downstream 411072 11540432 ~ 11561870 (+) True AMCG00014371
AMCG00014373 mRNA downstream 476608 11605968 ~ 11640460 (+) True AMCG00014373
AMCG00014376 mRNA downstream 514668 11644028 ~ 11659546 (+) True AMCG00014376
TU86705 other upstream 1116751 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 3708805 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 3775932 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 6473435 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 3207498 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 4546271 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 4546271 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 5000165 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 5336321 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile