RNA id: AMCG00014381



Basic Information


Item Value
RNA id AMCG00014381
length 534
RNA type mRNA
GC content 0.51
exon number 1
gene id AMCG00014381
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11711398 ~ 11711931 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGAGCTATTTTGTCCAGACGCACTGCAAAGAAGTCGGGCAGGGTTCTGCTCCTGGGCCTAGATTCGTCAGGAAAGTCCACTCTCCTCTACAAGGTCAAGAGGGACCAAACGGTTGAAACCTCTCCCACTATCGGCTTTAATGTGGAAATGTTGGAGCTGGAAAACCAGGTAACATTAACCATGTGGGATGTCGGCGGACAGGGGCAGATGAGGACCAACTGGAGGCATTACTTGGAAGATTGTGACATTCTGGTGTTTGTGGTGGACGGTGCTGATGCTTCCAGGCTGGACGAGGCTAAGAAGGCCCTGAAGCAGGTCTTGAATGATGAAAACATGAACAAGGTCCCCTTACTGGTCCTGGCCAACAAGAAGGACCTTCCCAACTCACTGACCATCCAGGACATTTCCAACAGGCTAGCGCTCCCCAGCTATGAGGACAGAGATTGGGAGATCCAGGCATGCAGTGCCTACACAGGGTTTGGGCTCCAACAAGCCTGCCAGTCATTGGGCAAACTCATTAAAAACAAGTAG

Function


GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K07959 ARL11; ADP-ribosylation factor-like protein 11

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87041 lncRNA upstream 69946 11641083 ~ 11641452 (+) True G69681
TU86944 lncRNA upstream 490124 11221070 ~ 11221274 (+) True G69610
TU86875 lncRNA upstream 749469 10959326 ~ 10961929 (+) True G69556
TU86857 lncRNA upstream 873168 10837204 ~ 10838230 (+) True G69540
TU86811 lncRNA upstream 1218002 10493147 ~ 10493396 (+) True G69499
TU87100 lncRNA downstream 7387 11719318 ~ 11722767 (+) True G69722
TU87118 lncRNA downstream 71934 11783865 ~ 11784083 (+) True G69739
TU87160 lncRNA downstream 888173 12600104 ~ 12600313 (+) True G69778
TU87223 lncRNA downstream 1268328 12980259 ~ 12982434 (+) True G69833
TU87357 lncRNA downstream 1534378 13246309 ~ 13251732 (+) True AMCG00014407
AMCG00014377 mRNA upstream 14472 11689233 ~ 11696926 (+) True AMCG00014377
AMCG00014378 mRNA upstream 33217 11668156 ~ 11678181 (+) True AMCG00014378
AMCG00014376 mRNA upstream 51852 11644028 ~ 11659546 (+) True AMCG00014376
AMCG00014373 mRNA upstream 70938 11605968 ~ 11640460 (+) True AMCG00014373
AMCG00014371 mRNA upstream 149528 11540432 ~ 11561870 (+) True AMCG00014371
AMCG00014382 mRNA downstream 47970 11759901 ~ 11761901 (+) True AMCG00014382
AMCG00014375 mRNA downstream 54497 11766428 ~ 11767590 (+) True AMCG00014375
AMCG00014383 mRNA downstream 158094 11870025 ~ 11877714 (+) True AMCG00014383
AMCG00014387 mRNA downstream 188591 11900522 ~ 11901421 (+) True AMCG00014387
AMCG00014388 mRNA downstream 231644 11943575 ~ 11944826 (+) True AMCG00014388
TU86705 other upstream 1702750 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 4294804 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 4361931 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 7059434 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 2624927 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 3963700 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 3963700 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 4417594 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 4753750 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile