RNA id: AMCG00014385


Basic Information

Item Value
RNA id AMCG00014385
length 573
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00014385
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 11866611 ~ 11867529 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGCTCGTCTGTTCTGTTTAACGTGTCCATTGCGCATCAGATTGAAGCGTTGGCGTTGCTCAAGCAGGTGCCTTTACAGGAAAGGCTGAAGACTGATTGCCAGGGTGGTTTGGAAAGGCAAGCAGACGTCCGGAATATGTTTATTTCTAAGCAGGACTGTCCTGTAAAGGAAAGGCGTGCTTTCAGTGGGGGTTTGGGCTTTGTTTCTGGGCTGGACAGCAGAAAGAAAGTGCGCACACTGGCACAGAAAGCTCGGGAGGGTACTTTCACAAGGTTACATGAGATACTTTCCCAGCTCATCTCAGTGGAGCAGGACATGTGTGGCTTTGTCTCTCGGGAGGATGGCATGATATTGCACCCCAAGgacagTATTGAGTTGCGAAACATCTGCCGGCGCATGGCTACCAGCCCTGAGGGATGCCACTCAGATATGGCCTTAAAGGAGCTCAGAGACTGTTTGAAAGCCATTGTTGATAGCCTGCTTCTGTCTCTGAGAATCTGCAAGTCTCTGTTACATACACAGGCAAGAGGGAAACTGACAGGCATATGTGGGTCTTTTCCTGACCTTTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87123 lncRNA downstream 95218 11769690 ~ 11771393 (-) True G69743
TU86933 lncRNA downstream 729525 11132788 ~ 11137086 (-) False AMCG00014365
TU86856 lncRNA downstream 1045539 10815771 ~ 10821072 (-) True G69539
TU86853 lncRNA downstream 1070422 10795883 ~ 10796189 (-) True G69536
TU86852 lncRNA downstream 1073465 10792919 ~ 10793146 (-) True G69535
TU87141 lncRNA upstream 11568 11879097 ~ 11880456 (-) True G69759
TU87239 lncRNA upstream 1102724 12970253 ~ 12970555 (-) True G69849
TU87308 lncRNA upstream 1217834 13085363 ~ 13086345 (-) True G69896
TU87309 lncRNA upstream 1217834 13085363 ~ 13086345 (-) False G69896
TU87311 lncRNA upstream 1217834 13085363 ~ 13086345 (-) False G69896
AMCG00014379 mRNA downstream 111150 11750191 ~ 11755461 (-) True AMCG00014379
AMCG00014380 mRNA downstream 144158 11697189 ~ 11722453 (-) True AMCG00014380
AMCG00014374 mRNA downstream 199074 11660011 ~ 11667537 (-) True AMCG00014374
AMCG00014372 mRNA downstream 364010 11459613 ~ 11502601 (-) True AMCG00014372
AMCG00014367 mRNA downstream 691169 11167640 ~ 11175442 (-) True AMCG00014367
AMCG00014386 mRNA upstream 14966 11882495 ~ 11891473 (-) True AMCG00014386
AMCG00014384 mRNA upstream 26231 11893760 ~ 11895883 (-) True AMCG00014384
AMCG00014390 mRNA upstream 116544 11984073 ~ 12003809 (-) True AMCG00014390
AMCG00014391 mRNA upstream 329510 12197039 ~ 12199190 (-) True AMCG00014391
AMCG00014389 mRNA upstream 854213 12721742 ~ 12726644 (-) True AMCG00014389
TU87063 other downstream 204118 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 1068464 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 2549444 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 3482387 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 3708021 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 16462210 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 17521761 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 20395638 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 20729933 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 20729933 32597462 ~ 32619149 (-) False G73127

Expression Profile