RNA id: AMCG00014424



Basic Information


Item Value
RNA id AMCG00014424
length 1227
RNA type mRNA
GC content 0.54
exon number 8
gene id AMCG00014424
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 13744121 ~ 13747498 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GATATCACAGCACTCAGTATGGCTCAGGTGTGCAGGTCAGCAGGTGAAGCACTGTGGGGGATGTGTATAGGTGATGCTATGTCAATGCCAGTCCACTGGTACTACAACGTGAGCGACATCAAGAAGGACTTTGGGGGCTGGATCTCTGGTTACCAGGCACCGAAAAACACACACCCATCTAGCATCCTGACTCTCTCCAATTCAGcTGGAAGTGGACGGACAGCTCATCCCAATTCCAGTAGGCCCCCTGTAGTAGGAAACATCATTCTTCATAACAAGCTGAAGTACTGGAAGGAACCAGAGGGATCCGTTCATTACCACCAAGgCATGCAGGCCGGGGACAGTACTCTGAATGCCCAGTGTGCCCTGAAAGCAGCCCAGACTCTCAGGGAAGGTCAGTTCAGGAGTGTGAGTGAGGAAGGGGCACGGGCCGCCGTCCTCTCTAACTATGTGCAGTTCATGACCACACCTGGCACTCATTCGGATACCTACGCCGAGTCATTTCACAGGTCTTTCTTCGCTGACTGGCAAGAACAACAGCCTACCTCACCCAGCAAGATCCTGGAGTTTGCTGTTCAGCGCTACAGGCAGAAGATGAACATGTCATTCCCAGACAGTCAGCTAGATGCAATAGGCTGCCTCCCCATGGCTATACCATTCGTCCTCCAGTCTGCCACAGCCAACAAGGAGGAAGCTGTAACTGCAGCAGTAGAGTTTGTGAgactcacacacccacacccgcAGCTAGACAAGTATGTGTCTTTATACGCCGAGGTTCTGCACAGCACACTGAACGGAGCCTGTCTGAGGCAGCAGGCTGAAGCTGCCCTCCGATCTCCAGTCCTGGATACCTGGCAGACATGCTTGCCGTACATGGAGAGAGTTGCAGGGTTTCCAAAGCCTTCTGAAGAGAAGTTAAAGGTGCATCAGAGTGCTGTGGCATCGCTTGGTTTGGCATGCTACACTAAAGGAGCTCTCAGCAGCTTGTTTTACTTGGCCCACGAATATTACGATGACTTTGAAGGGGGGGTCCTGACAAACACCAACTGTGGAGGTGAAAACTGTAACCGTGGTGCCGCGCTGGGGGCCTTACTGGGGGCGGCTGCAGCTCATCAGGGCCGTGCCATCCCTCAGGCCTGGAAACATGGCCTTGTGGGCACGCACAGCCTGGTCACACAGCTCCTGGAGGATGGACTTTCACCACCCCAGCCAGCACAAATGGACtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87518 lncRNA upstream 47250 13694815 ~ 13696871 (+) True G70054
TU87516 lncRNA upstream 59629 13683043 ~ 13684492 (+) False AMCG00014423
TU87409 lncRNA upstream 363717 13377534 ~ 13380404 (+) True G69961
TU87408 lncRNA upstream 364528 13352333 ~ 13379593 (+) False G69961
TU87406 lncRNA upstream 408936 13334214 ~ 13335185 (+) True G69959
TU87727 lncRNA downstream 419948 14167446 ~ 14171012 (+) True G70221
TU87766 lncRNA downstream 446281 14193779 ~ 14194433 (+) False AMCG00014456
TU87767 lncRNA downstream 450482 14197980 ~ 14199308 (+) False AMCG00014456
TU87784 lncRNA downstream 719206 14466704 ~ 14467744 (+) True G70271
TU87814 lncRNA downstream 1432347 15179845 ~ 15180820 (+) True G70286
AMCG00014423 mRNA upstream 54933 13655238 ~ 13689188 (+) True AMCG00014423
AMCG00014421 mRNA upstream 94047 13630667 ~ 13650074 (+) True AMCG00014421
AMCG00014422 mRNA upstream 129103 13590920 ~ 13615018 (+) True AMCG00014422
AMCG00014420 mRNA upstream 292902 13450098 ~ 13451219 (+) True AMCG00014420
AMCG00014418 mRNA upstream 372745 13361748 ~ 13371376 (+) True AMCG00014418
AMCG00014426 mRNA downstream 2175 13749673 ~ 13788076 (+) True AMCG00014426
AMCG00014425 mRNA downstream 43651 13791149 ~ 13813879 (+) True AMCG00014425
AMCG00014427 mRNA downstream 72858 13820356 ~ 13827551 (+) True AMCG00014427
AMCG00014439 mRNA downstream 135221 13882719 ~ 13903655 (+) True AMCG00014439
AMCG00014440 mRNA downstream 158351 13905849 ~ 13921330 (+) True AMCG00014440
TU86705 other upstream 3735473 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 6327527 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 6394654 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 9092157 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 589360 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 1928133 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 1928133 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 2382027 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 2718183 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile