RNA id: AMCG00014446



Basic Information


Item Value
RNA id AMCG00014446
length 207
RNA type mRNA
GC content 0.52
exon number 1
gene id AMCG00014446
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14160636 ~ 14160842 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATGAAGACTCTGTAATGTCTTTCTTACTAAGCTCTCTTCCCACCACCTTCAGCCAGGGCTCCAGAGACCTGACCTCCCGCTTCCTGCAGCTCTGTCTCAGAGTCCAGAGGGACACCTGTGAGCAGTTCCAGCAACTCGACGGCAAGCAGTTTAAACTGGACTGCTGGAAACGGGCAGAAGTTAAGTGTTCCTTCTTAGCATAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87518 lncRNA upstream 463765 13694815 ~ 13696871 (+) True G70054
TU87516 lncRNA upstream 476144 13683043 ~ 13684492 (+) False AMCG00014423
TU87409 lncRNA upstream 780232 13377534 ~ 13380404 (+) True G69961
TU87408 lncRNA upstream 781043 13352333 ~ 13379593 (+) False G69961
TU87406 lncRNA upstream 825451 13334214 ~ 13335185 (+) True G69959
TU87727 lncRNA downstream 6604 14167446 ~ 14171012 (+) True G70221
TU87766 lncRNA downstream 32937 14193779 ~ 14194433 (+) False AMCG00014456
TU87767 lncRNA downstream 37138 14197980 ~ 14199308 (+) False AMCG00014456
TU87784 lncRNA downstream 305862 14466704 ~ 14467744 (+) True G70271
TU87814 lncRNA downstream 1019003 15179845 ~ 15180820 (+) True G70286
AMCG00014445 mRNA upstream 2910 14151299 ~ 14157726 (+) True AMCG00014445
AMCG00014443 mRNA upstream 17563 14138406 ~ 14143073 (+) True AMCG00014443
AMCG00014444 mRNA upstream 55142 14085512 ~ 14105494 (+) True AMCG00014444
AMCG00014442 mRNA upstream 195513 13944780 ~ 13965123 (+) True AMCG00014442
AMCG00014441 mRNA upstream 221531 13930882 ~ 13939105 (+) True AMCG00014441
AMCG00014447 mRNA downstream 1283 14162125 ~ 14163322 (+) True AMCG00014447
AMCG00014456 mRNA downstream 28722 14189564 ~ 14205014 (+) True AMCG00014456
AMCG00014458 mRNA downstream 62674 14223516 ~ 14235412 (+) True AMCG00014458
AMCG00014460 mRNA downstream 77169 14238011 ~ 14241495 (+) True AMCG00014460
AMCG00014461 mRNA downstream 141605 14302447 ~ 14342021 (+) True AMCG00014461
TU86705 other upstream 4151988 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 6744042 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 6811169 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 9508672 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 176016 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 1514789 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 1514789 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 1968683 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 2304839 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile