RNA id: TU87766



Basic Information


Item Value
RNA id TU87766
length 244
lncRNA type sense_over
GC content 0.43
exon number 3
gene id AMCG00014456
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14189564 ~ 14205014 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGCTTCAGTCCGGCATACATCAgGAATCTAGAGGATGAAACTAATTGTGATGAACCAGCAAAACAGGACTATTCCCTTTTCATGAAATTTGAGATTGTTGGCAGCAAAGACAGTTTCATTCATGACCAAACCAGTGGAAGACATCCCAACAatgaaaataaactgaagtgtACTGAATTAGCAGTAACCGGGACCGGTCTGCCAGTGTCTCTCACTCCTACTCCGGGACCATGCTTTGATTTTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87727 lncRNA upstream 22767 14167446 ~ 14171012 (+) True G70221
TU87518 lncRNA upstream 496908 13694815 ~ 13696871 (+) True G70054
TU87516 lncRNA upstream 509287 13683043 ~ 13684492 (+) False AMCG00014423
TU87409 lncRNA upstream 813375 13377534 ~ 13380404 (+) True G69961
TU87408 lncRNA upstream 814186 13352333 ~ 13379593 (+) False G69961
TU87767 lncRNA downstream 3547 14197980 ~ 14199308 (+) False AMCG00014456
TU87784 lncRNA downstream 272271 14466704 ~ 14467744 (+) True G70271
TU87814 lncRNA downstream 985412 15179845 ~ 15180820 (+) True G70286
TU87887 lncRNA downstream 1045223 15239656 ~ 15242333 (+) False AMCG00014470
TU87927 lncRNA downstream 1156209 15350642 ~ 15430852 (+) True G70378
AMCG00014447 mRNA upstream 30457 14162125 ~ 14163322 (+) True AMCG00014447
AMCG00014446 mRNA upstream 32937 14160636 ~ 14160842 (+) True AMCG00014446
AMCG00014445 mRNA upstream 36053 14151299 ~ 14157726 (+) True AMCG00014445
AMCG00014443 mRNA upstream 50706 14138406 ~ 14143073 (+) True AMCG00014443
AMCG00014444 mRNA upstream 88285 14085512 ~ 14105494 (+) True AMCG00014444
AMCG00014458 mRNA downstream 29083 14223516 ~ 14235412 (+) True AMCG00014458
AMCG00014460 mRNA downstream 43578 14238011 ~ 14241495 (+) True AMCG00014460
AMCG00014461 mRNA downstream 108014 14302447 ~ 14342021 (+) True AMCG00014461
AMCG00014459 mRNA downstream 176712 14371145 ~ 14380019 (+) True AMCG00014459
AMCG00014457 mRNA downstream 258093 14452526 ~ 14462108 (+) True AMCG00014457
TU86705 other upstream 4185131 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 6777185 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 6844312 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 9541815 4649200 ~ 4651964 (+) True G68475
TU87778 other downstream 142425 14336858 ~ 14356868 (+) False AMCG00014461
TU88057 other downstream 1481198 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 1481198 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 1935092 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 2271248 16465681 ~ 16469113 (+) False AMCG00014525

Expression Profile