RNA id: AMCG00014459



Basic Information


Item Value
RNA id AMCG00014459
length 591
RNA type mRNA
GC content 0.54
exon number 4
gene id AMCG00014459
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 14371145 ~ 14380019 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCAGCCACAGCAGATGAGTTCCTGTATGAGATCCAGTTTGAGTCTGATGATGCCAGGGCTCAGCTGGGGCCTTCAGTGGCACTGTGCCTCCTGGGAAGAGAGCGGGATGTGCAGTCTGGAATTGTGACATTGATCTTCAATATCATATTTGCTCCCTATAAGCCACTCAGGTGTTCTGCAATTCTCGCAGTCAAATGTGCCACAGGAGGAGTATGGAAATTTCCAATAACGCTGATCTCCACTGAGCCCGAGGTAGACGATGTCATCAATATTGAGGCTGCCGGGTTAAACAAGGTGTCAATGGTGGGATTTAGACTCACTAGCCAAACAAGCTTTACTCCAGGCATGTACAGCAAGAAGCACAGAGCTATGCTGGTAATACAGACTGCAGACATGCAGTGGACCTATGAGATCAGGGGTGTGCAGCAGCGTTACACCCCCCCGTCCTCCCAGTCCTCCAGAGCGCTGTCCTCTGGCCCCGTGAATGCGGTCACCGTGCGCCAGCGCAACTTCGTCCGTGAGAATCTGCAGCTGCCGGCCACAGCCGTGTCCTCCCCCATCAAAGGCCAGCCTCTCGTCGTCAGGACCAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87767 lncRNA upstream 171837 14197980 ~ 14199308 (+) False AMCG00014456
TU87766 lncRNA upstream 176712 14193779 ~ 14194433 (+) False AMCG00014456
TU87727 lncRNA upstream 200133 14167446 ~ 14171012 (+) True G70221
TU87518 lncRNA upstream 674274 13694815 ~ 13696871 (+) True G70054
TU87516 lncRNA upstream 686653 13683043 ~ 13684492 (+) False AMCG00014423
TU87784 lncRNA downstream 86685 14466704 ~ 14467744 (+) True G70271
TU87814 lncRNA downstream 799826 15179845 ~ 15180820 (+) True G70286
TU87887 lncRNA downstream 859637 15239656 ~ 15242333 (+) False AMCG00014470
TU87927 lncRNA downstream 970623 15350642 ~ 15430852 (+) True G70378
TU87973 lncRNA downstream 1070759 15450778 ~ 15451268 (+) True G70409
AMCG00014461 mRNA upstream 29124 14302447 ~ 14342021 (+) True AMCG00014461
AMCG00014460 mRNA upstream 129650 14238011 ~ 14241495 (+) True AMCG00014460
AMCG00014458 mRNA upstream 135733 14223516 ~ 14235412 (+) True AMCG00014458
AMCG00014456 mRNA upstream 166131 14189564 ~ 14205014 (+) True AMCG00014456
AMCG00014447 mRNA upstream 207823 14162125 ~ 14163322 (+) True AMCG00014447
AMCG00014457 mRNA downstream 72507 14452526 ~ 14462108 (+) True AMCG00014457
AMCG00014462 mRNA downstream 304714 14684733 ~ 14692283 (+) True AMCG00014462
AMCG00014465 mRNA downstream 339875 14719894 ~ 14750619 (+) True AMCG00014465
AMCG00014463 mRNA downstream 387468 14767487 ~ 14811135 (+) True AMCG00014463
AMCG00014466 mRNA downstream 443773 14823792 ~ 14828121 (+) True AMCG00014466
TU87778 other upstream 14277 14336858 ~ 14356868 (+) False AMCG00014461
TU86705 other upstream 4362497 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 6954551 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 7021678 7346195 ~ 7349467 (+) True G68830
TU85565 other upstream 9719181 4649200 ~ 4651964 (+) True G68475
TU88057 other downstream 1295612 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 1295612 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 1749506 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 2085662 16465681 ~ 16469113 (+) False AMCG00014525
TU88601 other downstream 3023492 17403511 ~ 17448453 (+) False AMCG00014553

Expression Profile