Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014462 |
| length | 555 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | AMCG00014462 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 14684733 ~ 14692283 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0048741 | skeletal muscle fiber development | biological_process |
| GO:0007525 | somatic muscle development | biological_process |
| GO:0016203 | muscle attachment | biological_process |
| GO:0045214 | sarcomere organization | biological_process |
| GO:0061053 | somite development | biological_process |
| GO:0042383 | sarcolemma | cellular_component |
| GO:0016010 | dystrophin-associated glycoprotein complex | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| GO:0003779 | actin binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87784 | lncRNA | upstream | 216989 | 14466704 ~ 14467744 (+) | True | G70271 |
| TU87767 | lncRNA | upstream | 485425 | 14197980 ~ 14199308 (+) | False | AMCG00014456 |
| TU87766 | lncRNA | upstream | 490300 | 14193779 ~ 14194433 (+) | False | AMCG00014456 |
| TU87727 | lncRNA | upstream | 513721 | 14167446 ~ 14171012 (+) | True | G70221 |
| TU87518 | lncRNA | upstream | 987862 | 13694815 ~ 13696871 (+) | True | G70054 |
| TU87814 | lncRNA | downstream | 487562 | 15179845 ~ 15180820 (+) | True | G70286 |
| TU87887 | lncRNA | downstream | 547373 | 15239656 ~ 15242333 (+) | False | AMCG00014470 |
| TU87927 | lncRNA | downstream | 658359 | 15350642 ~ 15430852 (+) | True | G70378 |
| TU87973 | lncRNA | downstream | 758495 | 15450778 ~ 15451268 (+) | True | G70409 |
| TU87977 | lncRNA | downstream | 808275 | 15500558 ~ 15500832 (+) | True | G70413 |
| AMCG00014457 | mRNA | upstream | 222625 | 14452526 ~ 14462108 (+) | True | AMCG00014457 |
| AMCG00014459 | mRNA | upstream | 304714 | 14371145 ~ 14380019 (+) | True | AMCG00014459 |
| AMCG00014461 | mRNA | upstream | 342712 | 14302447 ~ 14342021 (+) | True | AMCG00014461 |
| AMCG00014460 | mRNA | upstream | 443238 | 14238011 ~ 14241495 (+) | True | AMCG00014460 |
| AMCG00014458 | mRNA | upstream | 449321 | 14223516 ~ 14235412 (+) | True | AMCG00014458 |
| AMCG00014465 | mRNA | downstream | 27611 | 14719894 ~ 14750619 (+) | True | AMCG00014465 |
| AMCG00014463 | mRNA | downstream | 75204 | 14767487 ~ 14811135 (+) | True | AMCG00014463 |
| AMCG00014466 | mRNA | downstream | 131509 | 14823792 ~ 14828121 (+) | True | AMCG00014466 |
| AMCG00014467 | mRNA | downstream | 228130 | 14920413 ~ 14989067 (+) | True | AMCG00014467 |
| AMCG00014464 | mRNA | downstream | 330716 | 15022999 ~ 15043455 (+) | True | AMCG00014464 |
| TU87778 | other | upstream | 327865 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU86705 | other | upstream | 4676085 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 7268139 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 7335266 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85567 | other | upstream | 10032769 | 4649200 ~ 4651964 (+) | False | G68475 |
| TU88057 | other | downstream | 983348 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 983348 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 1437242 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 1773398 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88601 | other | downstream | 2711228 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
