RNA id: AMCG00014471


Basic Information

Item Value
RNA id AMCG00014471
length 1555
RNA type mRNA
GC content 0.52
exon number 9
gene id AMCG00014471
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15247771 ~ 15253971 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAACTGTGCCGGAGTGGTACGGACATCGCCGACAGAGACTGCAAACACTGACCGTCCCCTTTAAACACAGTCTTATGACTTCACACAACTCAATCACCTACACAGGAgtgacacacaggcacacacagctCGCCGTGCAGGGACAGGAGCAGACAGTGGGAGCACCACCGCGCACAACAGGATTGATACCGGGCCGCTGCTCAGTGACAGATCGACCAGGACTGAGTTTGCTGTCAGTCATGTGTAGGGTGATGTTCACCTCGCTCATCCTTTGCCTCTGGCTGGTCAAGAAGGGACAATGTAATCTTCAGGACACCTTGGAGGAGCTTCACGCCGAGTTTGCTGTCAGCTTCTACCAAAACTTAGCAGAAACTGATAACAACTCCAACCTCATAGTGTCACCAGCCAGCGTCTCTGTGTCTTTGGGATTGTTACAGTTTGGAGCCAAAGGAAATACCTTCGCCCAGCTGGAAAATGCCTTGAGATACAATGTAAATGATCTCAAGGTGCAAGACTTTCTGCTCAGGATGCAGAGAGATGCAGCCAACTCCAACCACCATGCCCGGCTCCAGCTGGCCAGTGCGCTGTTTGTGCAGAGTGGACTCCAGTTATCTCCAGCCTTCGCTCAGCATGCTGCCGCTTGGGCCAACAGCACCGTGCAGCAGGCCAACTTCAACCAACCCAACCAGACCCGTGCCCAGATCAACCACTGGGTCAGCACCCACAGTGCAGGGGAAATCCGTGACCTGCTGTTATGTGACCTGAGTGGGTGGGGTGCTCGGCAGATGGCTCTGGTCAGTACCATGGCCTTCAGGGGTACCTGGAGGAAACAGTTCCTGTTCACCGAGACGCAGAGCCTCCCCTTCACCACTGCAGATGGCTCCACGTTCCAGACTCCACTGGAGCACAGGTACAGTGTGGTGGAGCTCTCTTACCTGGGGAACGCAGTCAGCCTGTTTGTGGTCCTGCCCACCGAGAGGAAAACCTCCCTCTCCCTGATCGAGAGGTACATCAGTGCCCGTGCCATCACGTTGTGGGCAACCAGCCTCAGGAACACCAAGATGGACATCTTCCTGCCCAGattTAAAATCCAGAATAAATTCAACCTGAAGACGATCTTACCTCTGCTTGGCGTTTCTGACATATTTGATCCAATGGCAGCTGATTTTGGAGGGATTTCAGAAAAAGAAAGCCTGTATGTTTCCGAAGCCATTCATGAAGCAAAAATTGAAGTGACTGAAGAAGGAACCAAAGCAGGTGCAGCCACAGCCATGGTACTACTGAAGAGATCCAGAGCCCCCGTGTTCAAAGCAGACAggcccttcttcttcttcatacGACAAGCAAGCACAGGAACCATACTGTTCACGGGCAGAGTCCTGAACCCCCTGCAGTTGGCAGCCTGAGCCCAGCACCCTGTCCAGCTCCTTGGCTGGCATAGCGTGCTCTATGCCGATATTTATTGGGGACGTTCTGGAGGATACAAGAGTCTGTACAGCAAGAGGGacaacattttgtaaattttgtaaatacaatttgcatACATCTTTTTTCA

Function

GO: NA

KEGG:

id description
K23429 SERPINE3; serpin E3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU87887 lncRNA upstream 5438 15239656 ~ 15242333 (+) False AMCG00014470
TU87814 lncRNA upstream 66951 15179845 ~ 15180820 (+) True G70286
TU87784 lncRNA upstream 780027 14466704 ~ 14467744 (+) True G70271
TU87767 lncRNA upstream 1048463 14197980 ~ 14199308 (+) False AMCG00014456
TU87766 lncRNA upstream 1053338 14193779 ~ 14194433 (+) False AMCG00014456
TU87927 lncRNA downstream 96671 15350642 ~ 15430852 (+) True G70378
TU87973 lncRNA downstream 196807 15450778 ~ 15451268 (+) True G70409
TU87977 lncRNA downstream 246587 15500558 ~ 15500832 (+) True G70413
TU87979 lncRNA downstream 251843 15505814 ~ 15506048 (+) True G70415
TU87982 lncRNA downstream 268554 15522525 ~ 15525015 (+) True G70418
AMCG00014470 mRNA upstream 5465 15221914 ~ 15242306 (+) True AMCG00014470
AMCG00014468 mRNA upstream 68616 15164212 ~ 15179155 (+) True AMCG00014468
AMCG00014469 mRNA upstream 110235 15089695 ~ 15137536 (+) True AMCG00014469
AMCG00014464 mRNA upstream 204316 15022999 ~ 15043455 (+) True AMCG00014464
AMCG00014467 mRNA upstream 258704 14920413 ~ 14989067 (+) True AMCG00014467
AMCG00014472 mRNA downstream 19590 15273561 ~ 15287276 (+) True AMCG00014472
AMCG00014476 mRNA downstream 78958 15332929 ~ 15336221 (+) True AMCG00014476
AMCG00014480 mRNA downstream 111725 15365696 ~ 15371378 (+) True AMCG00014480
AMCG00014486 mRNA downstream 225481 15479452 ~ 15485053 (+) True AMCG00014486
AMCG00014481 mRNA downstream 241254 15495225 ~ 15499833 (+) True AMCG00014481
TU87778 other upstream 890903 14336858 ~ 14356868 (+) False AMCG00014461
TU86705 other upstream 5239123 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 7831177 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 7898304 7346195 ~ 7349467 (+) True G68830
TU85567 other upstream 10595807 4649200 ~ 4651964 (+) False G68475
TU88057 other downstream 421660 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other downstream 421660 15675631 ~ 15679788 (+) False AMCG00014490
TU88218 other downstream 875554 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 1211710 16465681 ~ 16469113 (+) False AMCG00014525
TU88601 other downstream 2149540 17403511 ~ 17448453 (+) False AMCG00014553

Expression Profile