Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014481 |
| length | 1008 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 2 |
| gene id | AMCG00014481 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 15495225 ~ 15499833 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007210 | serotonin receptor signaling pathway | biological_process |
| GO:0006939 | smooth muscle contraction | biological_process |
| GO:0046883 | regulation of hormone secretion | biological_process |
| GO:0050795 | regulation of behavior | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0043198 | dendritic shaft | cellular_component |
| GO:0004993 | G protein-coupled serotonin receptor activity | molecular_function |
| id | description |
|---|---|
| K04157 | HTR2; 5-hydroxytryptamine receptor 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU87973 | lncRNA | upstream | 43957 | 15450778 ~ 15451268 (+) | True | G70409 |
| TU87927 | lncRNA | upstream | 64373 | 15350642 ~ 15430852 (+) | True | G70378 |
| TU87887 | lncRNA | upstream | 252892 | 15239656 ~ 15242333 (+) | False | AMCG00014470 |
| TU87814 | lncRNA | upstream | 314405 | 15179845 ~ 15180820 (+) | True | G70286 |
| TU87784 | lncRNA | upstream | 1027481 | 14466704 ~ 14467744 (+) | True | G70271 |
| TU87977 | lncRNA | downstream | 725 | 15500558 ~ 15500832 (+) | True | G70413 |
| TU87979 | lncRNA | downstream | 5981 | 15505814 ~ 15506048 (+) | True | G70415 |
| TU87982 | lncRNA | downstream | 22692 | 15522525 ~ 15525015 (+) | True | G70418 |
| TU88084 | lncRNA | downstream | 227601 | 15727434 ~ 15728917 (+) | True | G70496 |
| TU88167 | lncRNA | downstream | 418580 | 15918413 ~ 15918621 (+) | True | G70562 |
| AMCG00014486 | mRNA | upstream | 10172 | 15479452 ~ 15485053 (+) | True | AMCG00014486 |
| AMCG00014480 | mRNA | upstream | 123847 | 15365696 ~ 15371378 (+) | True | AMCG00014480 |
| AMCG00014476 | mRNA | upstream | 159004 | 15332929 ~ 15336221 (+) | True | AMCG00014476 |
| AMCG00014472 | mRNA | upstream | 207949 | 15273561 ~ 15287276 (+) | True | AMCG00014472 |
| AMCG00014471 | mRNA | upstream | 241254 | 15247771 ~ 15253971 (+) | True | AMCG00014471 |
| AMCG00014482 | mRNA | downstream | 18038 | 15517871 ~ 15522481 (+) | True | AMCG00014482 |
| AMCG00014488 | mRNA | downstream | 100326 | 15600159 ~ 15617165 (+) | True | AMCG00014488 |
| AMCG00014489 | mRNA | downstream | 130357 | 15630190 ~ 15654845 (+) | True | AMCG00014489 |
| AMCG00014487 | mRNA | downstream | 157096 | 15656929 ~ 15671148 (+) | True | AMCG00014487 |
| AMCG00014490 | mRNA | downstream | 175950 | 15675783 ~ 15685899 (+) | False | AMCG00014490 |
| TU87778 | other | upstream | 1138357 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU86705 | other | upstream | 5486577 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU86046 | other | upstream | 8078631 | 7413640 ~ 7416594 (+) | True | G68848 |
| TU86015 | other | upstream | 8145758 | 7346195 ~ 7349467 (+) | True | G68830 |
| TU85567 | other | upstream | 10843261 | 4649200 ~ 4651964 (+) | False | G68475 |
| TU88057 | other | downstream | 175798 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | downstream | 175798 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU88218 | other | downstream | 629692 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88385 | other | downstream | 965848 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88601 | other | downstream | 1903678 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
