RNA id: AMCG00014490



Basic Information


Item Value
RNA id AMCG00014490
length 783
RNA type mRNA
GC content 0.60
exon number 4
gene id AMCG00014490
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15675631 ~ 15685899 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgtttctcCAAGTCTACAAACTCACCGGAGAGCTGCTTCTCCTGCTCCTCCCCAACGGGTGCGGGGTTCAAGAGGTGAGCGAAGACGGCGGCGAAGGGGTTTGCAGCCAGCGGCTCGGTGCGATACATCTCCCACAGCAGGTACAGGGCGGTCAGGCGCTGCGGCGAGCTGGGCAGGAGGTCTGGCTGCTGCAGCAGCATCACCAACACCGAGCCCACTCGGAAATGCTCGGCTTTCCCAAAGTAGTGATGGAAGGCAGTGGAAAGACCTTCAAAGGCCTGCAGACGGTCAACCCAAATGGCAAACGGCTTGAAGCTGATGAGGGAGTCCCTGTGTTGGTCCAGCAGTGTGAAGGTGCGGTGGGCTACGGCATCCGTGTGGACCCCGCACAGCCAGGGGGACAGCAGCTGGTAGAGGCTCTTGAACTGCGGACGGTCGATCCTGTACTGCTCCACGTACTGCAGGCTGGGGTCATGGAGCTGCAGGGCCGTCACCGTCCTCCCCCAGTAGCAGTTTATAAAAATCATCATGACCTGCCCATCGTCGGTGCTGCTGCAAAGGGCTGCCGCGTTGGCATCCAGCACCGCCAGTCCCAGCTGGAAAATGGCCTTGATGCCATCATAGAAGAAGCAGTCCACCACGCGGACAGCACTCTCAAAGGGCATGATGCTGAGGAACAGGGTGAGGAAccaggagagggagatggaggagagTGGGGAGAGGTCGGGGATGTGCTCGGCCAGCTCGGGCAGCCGCTCCTTTATCAGCTCTTCAAACACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU87982 lncRNA upstream 150768 15522525 ~ 15525015 (+) True G70418
TU87979 lncRNA upstream 169735 15505814 ~ 15506048 (+) True G70415
TU87977 lncRNA upstream 174951 15500558 ~ 15500832 (+) True G70413
TU87973 lncRNA upstream 224515 15450778 ~ 15451268 (+) True G70409
TU87927 lncRNA upstream 244931 15350642 ~ 15430852 (+) True G70378
TU88084 lncRNA downstream 41535 15727434 ~ 15728917 (+) True G70496
TU88167 lncRNA downstream 232514 15918413 ~ 15918621 (+) True G70562
TU88264 lncRNA downstream 551211 16237110 ~ 16240338 (+) True G70637
TU88391 lncRNA downstream 804512 16490411 ~ 16491118 (+) True G70735
TU88448 lncRNA downstream 1044979 16730878 ~ 16733637 (+) True G70776
AMCG00014487 mRNA upstream 4635 15656929 ~ 15671148 (+) True AMCG00014487
AMCG00014489 mRNA upstream 20938 15630190 ~ 15654845 (+) True AMCG00014489
AMCG00014488 mRNA upstream 58618 15600159 ~ 15617165 (+) True AMCG00014488
AMCG00014482 mRNA upstream 153302 15517871 ~ 15522481 (+) True AMCG00014482
AMCG00014481 mRNA upstream 175950 15495225 ~ 15499833 (+) True AMCG00014481
AMCG00014496 mRNA downstream 14255 15700154 ~ 15703459 (+) True AMCG00014496
AMCG00014494 mRNA downstream 29901 15715800 ~ 15725440 (+) True AMCG00014494
AMCG00014495 mRNA downstream 49746 15735645 ~ 15749118 (+) True AMCG00014495
AMCG00014501 mRNA downstream 94690 15780589 ~ 15781550 (+) True AMCG00014501
AMCG00014500 mRNA downstream 137377 15823276 ~ 15870879 (+) True AMCG00014500
TU87778 other upstream 1318915 14336858 ~ 14356868 (+) False AMCG00014461
TU86705 other upstream 5667135 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 8259189 7413640 ~ 7416594 (+) True G68848
TU86015 other upstream 8326316 7346195 ~ 7349467 (+) True G68830
TU85567 other upstream 11023819 4649200 ~ 4651964 (+) False G68475
TU88218 other downstream 443626 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 779782 16465681 ~ 16469113 (+) False AMCG00014525
TU88601 other downstream 1717612 17403511 ~ 17448453 (+) False AMCG00014553
TU88725 other downstream 2585955 18271854 ~ 18274360 (+) True G71004
TU89430 other downstream 7169443 22855342 ~ 22855646 (+) True G71525

Expression Profile