RNA id: AMCG00014503



Basic Information


Item Value
RNA id AMCG00014503
length 942
RNA type mRNA
GC content 0.47
exon number 7
gene id AMCG00014503
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 15874583 ~ 15877671 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CAATGCATCCAGTTGCCCTCCGTGCTCCCCCTGTATGCCTTGCAGGGAGATGCAGTACAGCTGAAGTGCGACGATCCGCTTAGCTACCTGGGCTGGTCGGTCCCCCAGGGATTCATCTACCAGTGGATCCGTGATGGCACCAGGGTATCGGTCTCAGTGAGTGAGGGCAGAGTCGAGATGCAGGAGGAGCTCCTGCTATTTTTGCCTGCTCTCACTGGAGACTCTGGGAATTACACCTGCATCCTCAGGAATGACTCATACTGTGTGTCCAGCCCCATCCTTCTGAATGTCTACGAAAGCAAGCTCAACAATCTGGATGACATCTCGTACTTAAATGAAGCAAATCCAGGCACTTTGGGAATGGTGATTTGCCCCGATTTACCAAACTTTCTCACAATGGCCAACTGGGGAGACCTGAAATGGTTCAAGGAATCTACCCCTATAGTATCCTCTGAAGAAAAAACCCGTTACAAGAGAGACGAAATGATTCTCTTCATTCAAGATGTAAAATTTGGAGATGAAGGTTACTACACCTGTGCACTCAATTTTTCATTTAACAACAAGCAATTGAAAGTGACAAGGACGATTAAGCTGCAAATTGCAGGAACACCAACCAAACCAAGTGTAACACATCCCCTCAGCAGCACCACTAGACCATCAGGAGAGCGTATTCCACCGAAGATCATCTATCCGATCAACGACACCTATGACAGCGAGCTTGGCTCCAGTCTGATAATCCCTTGTCAAGTTCTTCCAGGACAGCAATCAGCGCACACAACTGATGTCACATGGCTGGTTAATGGGCTGAACGTTGAAGACTTTTTCATCAGCAGTCGTGTCTTACAGGGAGAAAAGATACTGTATATTGAGAATGGAGCTTACTACATTCAGGTCGATCTCATCATTACTGAATTGCTCAAAGAAGATACAAAATCCGAGTTT

Function


GO: NA

KEGG:

id description
K04387 IL1R2, CD121b; interleukin 1 receptor type II

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU88084 lncRNA upstream 145666 15727434 ~ 15728917 (+) True G70496
TU87982 lncRNA upstream 349568 15522525 ~ 15525015 (+) True G70418
TU87979 lncRNA upstream 368535 15505814 ~ 15506048 (+) True G70415
TU87977 lncRNA upstream 373751 15500558 ~ 15500832 (+) True G70413
TU87973 lncRNA upstream 423315 15450778 ~ 15451268 (+) True G70409
TU88167 lncRNA downstream 40742 15918413 ~ 15918621 (+) True G70562
TU88264 lncRNA downstream 359439 16237110 ~ 16240338 (+) True G70637
TU88391 lncRNA downstream 612740 16490411 ~ 16491118 (+) True G70735
TU88448 lncRNA downstream 853207 16730878 ~ 16733637 (+) True G70776
TU88522 lncRNA downstream 1151289 17028960 ~ 17097964 (+) True G70835
AMCG00014500 mRNA upstream 3704 15823276 ~ 15870879 (+) True AMCG00014500
AMCG00014501 mRNA upstream 93033 15780589 ~ 15781550 (+) True AMCG00014501
AMCG00014495 mRNA upstream 125465 15735645 ~ 15749118 (+) True AMCG00014495
AMCG00014494 mRNA upstream 149143 15715800 ~ 15725440 (+) True AMCG00014494
AMCG00014496 mRNA upstream 171124 15700154 ~ 15703459 (+) True AMCG00014496
AMCG00014505 mRNA downstream 7592 15885263 ~ 15903047 (+) True AMCG00014505
AMCG00014504 mRNA downstream 29910 15907581 ~ 15916966 (+) True AMCG00014504
AMCG00014502 mRNA downstream 69909 15947580 ~ 15954701 (+) True AMCG00014502
AMCG00014506 mRNA downstream 130728 16008399 ~ 16036760 (+) True AMCG00014506
AMCG00014508 mRNA downstream 251808 16129479 ~ 16139032 (+) True AMCG00014508
TU88057 other upstream 194795 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other upstream 194795 15675631 ~ 15679788 (+) False AMCG00014490
TU87778 other upstream 1517715 14336858 ~ 14356868 (+) False AMCG00014461
TU86705 other upstream 5865935 10003058 ~ 10008648 (+) True G69406
TU86046 other upstream 8457989 7413640 ~ 7416594 (+) True G68848
TU88218 other downstream 251854 16129525 ~ 16132802 (+) False AMCG00014508
TU88385 other downstream 588010 16465681 ~ 16469113 (+) False AMCG00014525
TU88601 other downstream 1525840 17403511 ~ 17448453 (+) False AMCG00014553
TU88725 other downstream 2394183 18271854 ~ 18274360 (+) True G71004
TU89430 other downstream 6977671 22855342 ~ 22855646 (+) True G71525

Expression Profile