Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014525 |
| length | 794 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | AMCG00014525 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 16465621 ~ 16469209 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0046688 | response to copper ion | biological_process |
| GO:0006825 | copper ion transport | biological_process |
| GO:0005758 | mitochondrial intermembrane space | cellular_component |
| GO:0016531 | copper chaperone activity | molecular_function |
| id | description |
|---|---|
| K02260 | COX17; cytochrome c oxidase assembly protein subunit 17 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88264 | lncRNA | upstream | 225283 | 16237110 ~ 16240338 (+) | True | G70637 |
| TU88167 | lncRNA | upstream | 547000 | 15918413 ~ 15918621 (+) | True | G70562 |
| TU88084 | lncRNA | upstream | 736704 | 15727434 ~ 15728917 (+) | True | G70496 |
| TU87982 | lncRNA | upstream | 940606 | 15522525 ~ 15525015 (+) | True | G70418 |
| TU87979 | lncRNA | upstream | 959573 | 15505814 ~ 15506048 (+) | True | G70415 |
| TU88391 | lncRNA | downstream | 21202 | 16490411 ~ 16491118 (+) | True | G70735 |
| TU88448 | lncRNA | downstream | 261669 | 16730878 ~ 16733637 (+) | True | G70776 |
| TU88522 | lncRNA | downstream | 559751 | 17028960 ~ 17097964 (+) | True | G70835 |
| TU88535 | lncRNA | downstream | 662854 | 17132063 ~ 17173062 (+) | True | G70846 |
| TU88555 | lncRNA | downstream | 781110 | 17250319 ~ 17253671 (+) | True | G70865 |
| AMCG00014522 | mRNA | upstream | 14970 | 16448663 ~ 16450651 (+) | True | AMCG00014522 |
| AMCG00014524 | mRNA | upstream | 26884 | 16437177 ~ 16438737 (+) | True | AMCG00014524 |
| AMCG00014517 | mRNA | upstream | 91864 | 16371753 ~ 16373757 (+) | True | AMCG00014517 |
| AMCG00014516 | mRNA | upstream | 94994 | 16346034 ~ 16370627 (+) | True | AMCG00014516 |
| AMCG00014513 | mRNA | upstream | 187183 | 16258241 ~ 16278438 (+) | True | AMCG00014513 |
| AMCG00014523 | mRNA | downstream | 4585 | 16473794 ~ 16481556 (+) | True | AMCG00014523 |
| AMCG00014531 | mRNA | downstream | 88355 | 16557564 ~ 16578157 (+) | True | AMCG00014531 |
| AMCG00014535 | mRNA | downstream | 114615 | 16583824 ~ 16611661 (+) | True | AMCG00014535 |
| AMCG00014537 | mRNA | downstream | 222803 | 16692012 ~ 16719737 (+) | True | AMCG00014537 |
| AMCG00014538 | mRNA | downstream | 252989 | 16722198 ~ 16731869 (+) | True | AMCG00014538 |
| TU88218 | other | upstream | 332819 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88057 | other | upstream | 785833 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | upstream | 785833 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU87778 | other | upstream | 2108753 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU86705 | other | upstream | 6456973 | 10003058 ~ 10008648 (+) | True | G69406 |
| TU88601 | other | downstream | 934302 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
| TU88725 | other | downstream | 1802645 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU89430 | other | downstream | 6386133 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU90165 | other | downstream | 11366294 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90175 | other | downstream | 11399494 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
