Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014553 |
| length | 1272 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 6 |
| gene id | AMCG00014553 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 17364798 ~ 17487050 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0006754 | ATP biosynthetic process | biological_process |
| GO:0006200 | obsolete ATP catabolic process | biological_process |
| GO:0015672 | monovalent inorganic cation transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0019829 | ATPase-coupled cation transmembrane transporter activity | molecular_function |
| GO:0015077 | monovalent inorganic cation transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88591 | lncRNA | upstream | 13846 | 17349436 ~ 17350952 (+) | True | G70897 |
| TU88575 | lncRNA | upstream | 47242 | 17316253 ~ 17317556 (+) | True | G70883 |
| TU88555 | lncRNA | upstream | 111127 | 17250319 ~ 17253671 (+) | True | G70865 |
| TU88535 | lncRNA | upstream | 191736 | 17132063 ~ 17173062 (+) | True | G70846 |
| TU88522 | lncRNA | upstream | 266834 | 17028960 ~ 17097964 (+) | True | G70835 |
| TU88613 | lncRNA | downstream | 58595 | 17489826 ~ 17490607 (+) | True | G70908 |
| TU88649 | lncRNA | downstream | 219540 | 17650771 ~ 17651002 (+) | True | G70938 |
| TU88777 | lncRNA | downstream | 1033988 | 18465219 ~ 18468335 (+) | True | G71036 |
| TU88779 | lncRNA | downstream | 1045812 | 18477043 ~ 18478028 (+) | True | G71038 |
| TU88954 | lncRNA | downstream | 1257317 | 18688548 ~ 18692633 (+) | True | G71136 |
| AMCG00014552 | mRNA | upstream | 31983 | 17328913 ~ 17332815 (+) | True | AMCG00014552 |
| AMCG00014536 | mRNA | upstream | 599246 | 16737483 ~ 16765552 (+) | True | AMCG00014536 |
| AMCG00014538 | mRNA | upstream | 632929 | 16722198 ~ 16731869 (+) | True | AMCG00014538 |
| AMCG00014537 | mRNA | upstream | 645061 | 16692012 ~ 16719737 (+) | True | AMCG00014537 |
| AMCG00014535 | mRNA | upstream | 753137 | 16583824 ~ 16611661 (+) | True | AMCG00014535 |
| AMCG00014560 | mRNA | downstream | 348334 | 17779565 ~ 17780081 (+) | True | AMCG00014560 |
| AMCG00014565 | mRNA | downstream | 518329 | 17949560 ~ 18029896 (+) | True | AMCG00014565 |
| AMCG00014564 | mRNA | downstream | 606877 | 18038108 ~ 18067182 (+) | True | AMCG00014564 |
| AMCG00014563 | mRNA | downstream | 639303 | 18070534 ~ 18080340 (+) | True | AMCG00014563 |
| AMCG00014569 | mRNA | downstream | 893039 | 18324270 ~ 18332414 (+) | True | AMCG00014569 |
| TU88385 | other | upstream | 895685 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88218 | other | upstream | 1231996 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88057 | other | upstream | 1685010 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU88058 | other | upstream | 1685010 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU87778 | other | upstream | 3007930 | 14336858 ~ 14356868 (+) | False | AMCG00014461 |
| TU88725 | other | downstream | 840623 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU89430 | other | downstream | 5424111 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU90165 | other | downstream | 10404272 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90175 | other | downstream | 10437472 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90214 | other | downstream | 10871142 | 28302373 ~ 28304073 (+) | True | G72175 |
