RNA id: AMCG00014560



Basic Information


Item Value
RNA id AMCG00014560
length 426
RNA type mRNA
GC content 0.39
exon number 2
gene id AMCG00014560
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 17779565 ~ 17780081 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGGAAACGCTAATATTGCCACTCAAATTAATGAAGGCTACTGTCTTTCAGTTCGGAGACTCAATGATCTTGTGCAAAAGAACCGATATGTTCTCTTGAGGATAATAGACAGCATCAAACCGTCAGTTGGCAACCACCTTGCAAGTGAAACTGTATCAAAAGATACATCAAAGACCATACAAAAAGAACTGCTTGATTGCATGCTTGCATTGTATGAAAGTAAAATAGCTGAAGTTGCAGATGCAAGATTCGTATCAGTAAAAGCAGACGAAACTACAGACGTGTCATGTGTCAGTCAGCTAGTGATCATGCTCAGATATGTAGTGCCAGGATCTGCAGTGAAGAGATTTATTGGTTTTTTTGAAGTTCAGGACCAAACAGCAGAAGCTACTCATTTGAAGCAAAAACTAGAGCCTTACAAATGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU88649 lncRNA upstream 128563 17650771 ~ 17651002 (+) True G70938
TU88613 lncRNA upstream 288958 17489826 ~ 17490607 (+) True G70908
TU88604 lncRNA upstream 292515 17418439 ~ 17487050 (+) False AMCG00014553
TU88599 lncRNA upstream 326198 17403511 ~ 17453367 (+) True AMCG00014553
TU88591 lncRNA upstream 428613 17349436 ~ 17350952 (+) True G70897
TU88777 lncRNA downstream 685138 18465219 ~ 18468335 (+) True G71036
TU88779 lncRNA downstream 696962 18477043 ~ 18478028 (+) True G71038
TU88954 lncRNA downstream 908467 18688548 ~ 18692633 (+) True G71136
TU89012 lncRNA downstream 1121144 18901225 ~ 18902161 (+) True G71183
TU89082 lncRNA downstream 1267877 19047958 ~ 19048172 (+) True G71237
AMCG00014553 mRNA upstream 348334 17364798 ~ 17431231 (+) False AMCG00014553
AMCG00014552 mRNA upstream 446750 17328913 ~ 17332815 (+) True AMCG00014552
AMCG00014536 mRNA upstream 1014013 16737483 ~ 16765552 (+) True AMCG00014536
AMCG00014538 mRNA upstream 1047696 16722198 ~ 16731869 (+) True AMCG00014538
AMCG00014537 mRNA upstream 1059828 16692012 ~ 16719737 (+) True AMCG00014537
AMCG00014565 mRNA downstream 169479 17949560 ~ 18029896 (+) True AMCG00014565
AMCG00014564 mRNA downstream 258027 18038108 ~ 18067182 (+) True AMCG00014564
AMCG00014563 mRNA downstream 290453 18070534 ~ 18080340 (+) True AMCG00014563
AMCG00014569 mRNA downstream 544189 18324270 ~ 18332414 (+) True AMCG00014569
AMCG00014574 mRNA downstream 594563 18374644 ~ 18395600 (+) True AMCG00014574
TU88601 other upstream 331112 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 1310452 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 1646763 16129525 ~ 16132802 (+) False AMCG00014508
TU88057 other upstream 2099777 15675631 ~ 15679788 (+) True AMCG00014490
TU88058 other upstream 2099777 15675631 ~ 15679788 (+) False AMCG00014490
TU88725 other downstream 491773 18271854 ~ 18274360 (+) True G71004
TU89430 other downstream 5075261 22855342 ~ 22855646 (+) True G71525
TU90165 other downstream 10055422 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 10088622 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 10522292 28302373 ~ 28304073 (+) True G72175

Expression Profile