Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014569 |
| length | 789 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 10 |
| gene id | AMCG00014569 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 18324270 ~ 18332414 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007219 | Notch signaling pathway | biological_process |
| GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0004221 | obsolete ubiquitin thiolesterase activity | molecular_function |
| GO:0004843 | thiol-dependent ubiquitin-specific protease activity | molecular_function |
| id | description |
|---|---|
| K05609 | UCHL3, YUH1; ubiquitin carboxyl-terminal hydrolase L3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU88649 | lncRNA | upstream | 673268 | 17650771 ~ 17651002 (+) | True | G70938 |
| TU88613 | lncRNA | upstream | 833663 | 17489826 ~ 17490607 (+) | True | G70908 |
| TU88604 | lncRNA | upstream | 837220 | 17418439 ~ 17487050 (+) | False | AMCG00014553 |
| TU88599 | lncRNA | upstream | 870903 | 17403511 ~ 17453367 (+) | True | AMCG00014553 |
| TU88591 | lncRNA | upstream | 973318 | 17349436 ~ 17350952 (+) | True | G70897 |
| TU88777 | lncRNA | downstream | 132805 | 18465219 ~ 18468335 (+) | True | G71036 |
| TU88779 | lncRNA | downstream | 144629 | 18477043 ~ 18478028 (+) | True | G71038 |
| TU88954 | lncRNA | downstream | 356134 | 18688548 ~ 18692633 (+) | True | G71136 |
| TU89012 | lncRNA | downstream | 568811 | 18901225 ~ 18902161 (+) | True | G71183 |
| TU89082 | lncRNA | downstream | 715544 | 19047958 ~ 19048172 (+) | True | G71237 |
| AMCG00014563 | mRNA | upstream | 243930 | 18070534 ~ 18080340 (+) | True | AMCG00014563 |
| AMCG00014564 | mRNA | upstream | 257088 | 18038108 ~ 18067182 (+) | True | AMCG00014564 |
| AMCG00014565 | mRNA | upstream | 294374 | 17949560 ~ 18029896 (+) | True | AMCG00014565 |
| AMCG00014560 | mRNA | upstream | 544189 | 17779565 ~ 17780081 (+) | True | AMCG00014560 |
| AMCG00014553 | mRNA | upstream | 893039 | 17364798 ~ 17431231 (+) | False | AMCG00014553 |
| AMCG00014574 | mRNA | downstream | 42230 | 18374644 ~ 18395600 (+) | True | AMCG00014574 |
| AMCG00014573 | mRNA | downstream | 138137 | 18470551 ~ 18475184 (+) | True | AMCG00014573 |
| AMCG00014575 | mRNA | downstream | 145995 | 18478409 ~ 18480032 (+) | True | AMCG00014575 |
| AMCG00014583 | mRNA | downstream | 254020 | 18586434 ~ 18609444 (+) | True | AMCG00014583 |
| AMCG00014580 | mRNA | downstream | 278146 | 18610560 ~ 18624589 (+) | True | AMCG00014580 |
| TU88725 | other | upstream | 49910 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU88601 | other | upstream | 875817 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
| TU88385 | other | upstream | 1855157 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88218 | other | upstream | 2191468 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88057 | other | upstream | 2644482 | 15675631 ~ 15679788 (+) | True | AMCG00014490 |
| TU89430 | other | downstream | 4522928 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU90165 | other | downstream | 9503089 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90175 | other | downstream | 9536289 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90214 | other | downstream | 9969959 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90740 | other | downstream | 11519036 | 29851450 ~ 29851821 (+) | True | G72605 |
