RNA id: AMCG00014598



Basic Information


Item Value
RNA id AMCG00014598
length 666
RNA type mRNA
GC content 0.41
exon number 3
gene id AMCG00014598
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 19045683 ~ 19047641 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCCAGTTTTCAGAGCTAGGGAAGGCCAGCGAGTCAGTTTTATCTGAGTTACAAACAACTGAGAAACAAATCCACAATCTTGGTGATGAAATGGTGCAGCTGCAGAAGCACTCAGAGTGTCTGGAGCTCCAGTCAGAAGCTGCCTACATGGAAAATGTGCAGCTTCAAATTAGCATCGAACAAGAGGAGGAGAACTTCCAGTTGCTGTTAGCAGGGCACAACACATACCGAAATAAAATGGAAGCTCACAAAGAAGTTGTCTCTCAAGTGGAAGGTAAAACTGCAACGCAGAAGGAACTCATGGACAAGAGAGACTTAGttaaaaaacttaaacaaaGGAAGGAGGAGCTGAGGATTGATCTTCTGAATCCAGAGGGAAATGTAGTTAGACAAGTACAGgAAGAAATTGATGACTTAAAGGTACAGATATCAGAGATGAAGGAGAATGTCAAGGACAAGACTGTATGCATTGTTAAGGAACAGGGAATTCACACACAACTGAAGAAGGATATTGAGATACAAAACAGGAGATGTGAGGCAATTCTGAAGCGTCTTCATTGTCAGTTGAACAAGGCCCAGTCCAACAAAAGACAATTGATCTGGGACATTCACCAGATGGAGAAAAAAATTGAAGatctcagaaaatgttttgtaatcaCAGATTAA

Function


GO: NA

KEGG:

id description
ko04110 Cell cycle

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89012 lncRNA upstream 143522 18901225 ~ 18902161 (+) True G71183
TU88954 lncRNA upstream 353050 18688548 ~ 18692633 (+) True G71136
TU88779 lncRNA upstream 567655 18477043 ~ 18478028 (+) True G71038
TU88777 lncRNA upstream 577348 18465219 ~ 18468335 (+) True G71036
TU88649 lncRNA upstream 1394681 17650771 ~ 17651002 (+) True G70938
TU89082 lncRNA downstream 317 19047958 ~ 19048172 (+) True G71237
TU89148 lncRNA downstream 170676 19218317 ~ 19222919 (+) True G71283
TU89156 lncRNA downstream 170676 19218317 ~ 19222919 (+) False G71283
TU89157 lncRNA downstream 170676 19218317 ~ 19222919 (+) False G71283
TU89246 lncRNA downstream 877261 19924902 ~ 19925198 (+) True G71362
AMCG00014595 mRNA upstream 82640 18949313 ~ 18963043 (+) True AMCG00014595
AMCG00014594 mRNA upstream 145483 18889772 ~ 18900200 (+) True AMCG00014594
AMCG00014596 mRNA upstream 167410 18853308 ~ 18878273 (+) True AMCG00014596
AMCG00014591 mRNA upstream 199712 18803406 ~ 18845971 (+) True AMCG00014591
AMCG00014592 mRNA upstream 259156 18782057 ~ 18786527 (+) True AMCG00014592
AMCG00014599 mRNA downstream 652 19048293 ~ 19056463 (+) True AMCG00014599
AMCG00014607 mRNA downstream 136638 19184279 ~ 19190953 (+) True AMCG00014607
AMCG00014613 mRNA downstream 145778 19193419 ~ 19196839 (+) True AMCG00014613
AMCG00014612 mRNA downstream 166635 19214276 ~ 19216333 (+) True AMCG00014612
AMCG00014610 mRNA downstream 176140 19223781 ~ 19236789 (+) True AMCG00014610
TU88725 other upstream 771323 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 1597230 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 2576570 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 2912881 16129525 ~ 16132802 (+) False AMCG00014508
TU88058 other upstream 3365895 15675631 ~ 15679788 (+) False AMCG00014490
TU89430 other downstream 3807701 22855342 ~ 22855646 (+) True G71525
TU90165 other downstream 8787862 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 8821062 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 9254732 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 10803809 29851450 ~ 29851821 (+) True G72605

Expression Profile