Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014619 |
| length | 1224 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 9 |
| gene id | AMCG00014619 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 20024521 ~ 20073070 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0060219 | camera-type eye photoreceptor cell differentiation | biological_process |
| GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | biological_process |
| GO:0005886 | plasma membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU89246 | lncRNA | upstream | 99323 | 19924902 ~ 19925198 (+) | True | G71362 |
| TU89148 | lncRNA | upstream | 801602 | 19218317 ~ 19222919 (+) | True | G71283 |
| TU89156 | lncRNA | upstream | 801602 | 19218317 ~ 19222919 (+) | False | G71283 |
| TU89157 | lncRNA | upstream | 801602 | 19218317 ~ 19222919 (+) | False | G71283 |
| TU89082 | lncRNA | upstream | 976349 | 19047958 ~ 19048172 (+) | True | G71237 |
| TU89263 | lncRNA | downstream | 113544 | 20186614 ~ 20186966 (+) | True | G71378 |
| TU89305 | lncRNA | downstream | 851498 | 20924568 ~ 20924837 (+) | True | G71414 |
| TU89315 | lncRNA | downstream | 1238520 | 21311590 ~ 21312022 (+) | True | G71424 |
| TU89346 | lncRNA | downstream | 2046513 | 22119583 ~ 22122533 (+) | True | G71452 |
| TU89354 | lncRNA | downstream | 2115569 | 22188639 ~ 22188927 (+) | True | G71459 |
| AMCG00014618 | mRNA | upstream | 2827 | 19959589 ~ 20021694 (+) | True | AMCG00014618 |
| AMCG00014617 | mRNA | upstream | 180479 | 19843152 ~ 19844042 (+) | True | AMCG00014617 |
| AMCG00014605 | mRNA | upstream | 640202 | 19380431 ~ 19384319 (+) | True | AMCG00014605 |
| AMCG00014611 | mRNA | upstream | 693603 | 19319869 ~ 19330918 (+) | True | AMCG00014611 |
| AMCG00014606 | mRNA | upstream | 707266 | 19296416 ~ 19317255 (+) | True | AMCG00014606 |
| AMCG00014624 | mRNA | downstream | 573269 | 20646339 ~ 20667180 (+) | True | AMCG00014624 |
| AMCG00014632 | mRNA | downstream | 2174711 | 22247781 ~ 22264000 (+) | True | AMCG00014632 |
| AMCG00014635 | mRNA | downstream | 4309697 | 24382767 ~ 24385815 (+) | True | AMCG00014635 |
| AMCG00014636 | mRNA | downstream | 4619216 | 24692286 ~ 24759297 (+) | True | AMCG00014636 |
| AMCG00014638 | mRNA | downstream | 4815463 | 24888533 ~ 24897009 (+) | True | AMCG00014638 |
| TU88725 | other | upstream | 1750161 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU88601 | other | upstream | 2576068 | 17403511 ~ 17448453 (+) | False | AMCG00014553 |
| TU88385 | other | upstream | 3555408 | 16465681 ~ 16469113 (+) | False | AMCG00014525 |
| TU88218 | other | upstream | 3891719 | 16129525 ~ 16132802 (+) | False | AMCG00014508 |
| TU88058 | other | upstream | 4344733 | 15675631 ~ 15679788 (+) | False | AMCG00014490 |
| TU89430 | other | downstream | 2782272 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU90165 | other | downstream | 7762433 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU90175 | other | downstream | 7795633 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90214 | other | downstream | 8229303 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90740 | other | downstream | 9778380 | 29851450 ~ 29851821 (+) | True | G72605 |
