RNA id: AMCG00014632



Basic Information


Item Value
RNA id AMCG00014632
length 732
RNA type mRNA
GC content 0.47
exon number 7
gene id AMCG00014632
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 22247781 ~ 22264000 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATAACCAGGCAGTGAGCAGATATCAAGTGTTGCACAATGAGGATGATCCCTCTGAGCCGTCTGCCACCCAAGAGGCATCCAGTTCTGTTCAGATTCCACCTCCTTCTGAATCTGCAGTGCCATTGGAGGTTCCGCCGCCTCCTTACAGCAGTGTTGCTTTAGGAGCAACTGCAGCTCCAGAAGGTGATTATCACCGTGATTTCCACCCTGTCCCGCCTCCATACAGTGTTGCTACCTCCTTGCCCACCTATGATGAAGCAGAAAAGGCCAAAGCTGCAGCAATGTCTGCTGCCTCAATGGATGTTGTGCAGAGGGAGGACGATTTCCCACCTAGAGATGACTTCAGTGATGCTGATCAGCTGAGAGTTGGAAATGATGGGATATTCATGTTGGCGTTTTTCATGGCTTTTCTTTTCAACTGGATTGGcttttgtctgtctttctgcctGACCAACACTATAGCAGGAAGATATGGTGCAATCTGTGGATTCGGCCTTTCCCTTATTAAATGGATCCTCATTGTCAGGTTTTCTGATTATTTTACTGGATACTTCAATGGCCAGTACTGGTTGTGGTGGATATTCCTTGTCCTTGgtaagtttatttattgttccgTGGCAGGGGGTCTCCTGCTCTTCTTCAGAGGATTTGTGAACTACCTTAAAGTTCGTAACATGTCTGAAAGCATGGCAGCATCCCACAGGACGCGTTTCTTCTTCTTGTACTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89357 lncRNA upstream 17085 22228426 ~ 22230696 (+) True G71462
TU89355 lncRNA upstream 51906 22195619 ~ 22195875 (+) True G71460
TU89354 lncRNA upstream 58854 22188639 ~ 22188927 (+) True G71459
TU89346 lncRNA upstream 125248 22119583 ~ 22122533 (+) True G71452
TU89315 lncRNA upstream 935759 21311590 ~ 21312022 (+) True G71424
TU89423 lncRNA downstream 391358 22655358 ~ 22655614 (+) True G71518
TU89463 lncRNA downstream 1100760 23364760 ~ 23365002 (+) True G71557
TU89482 lncRNA downstream 1333118 23597118 ~ 23597323 (+) True G71574
TU89490 lncRNA downstream 1441163 23705163 ~ 23705434 (+) True G71581
TU89493 lncRNA downstream 1644385 23908385 ~ 23908649 (+) True G71584
AMCG00014624 mRNA upstream 1580601 20646339 ~ 20667180 (+) True AMCG00014624
AMCG00014619 mRNA upstream 2174711 20024521 ~ 20073070 (+) True AMCG00014619
AMCG00014618 mRNA upstream 2226087 19959589 ~ 20021694 (+) True AMCG00014618
AMCG00014617 mRNA upstream 2403739 19843152 ~ 19844042 (+) True AMCG00014617
AMCG00014605 mRNA upstream 2863462 19380431 ~ 19384319 (+) True AMCG00014605
AMCG00014635 mRNA downstream 2118767 24382767 ~ 24385815 (+) True AMCG00014635
AMCG00014636 mRNA downstream 2428286 24692286 ~ 24759297 (+) True AMCG00014636
AMCG00014638 mRNA downstream 2624533 24888533 ~ 24897009 (+) True AMCG00014638
AMCG00014637 mRNA downstream 2664031 24928031 ~ 24937965 (+) True AMCG00014637
AMCG00014643 mRNA downstream 2823014 25087014 ~ 25102638 (+) True AMCG00014643
TU88725 other upstream 3973421 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 4799328 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 5778668 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 6114979 16129525 ~ 16132802 (+) False AMCG00014508
TU88058 other upstream 6567993 15675631 ~ 15679788 (+) False AMCG00014490
TU89430 other downstream 591342 22855342 ~ 22855646 (+) True G71525
TU90165 other downstream 5571503 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 5604703 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 6038373 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 7587450 29851450 ~ 29851821 (+) True G72605

Expression Profile