RNA id: AMCG00014674


Basic Information

Item Value
RNA id AMCG00014674
length 1383
RNA type mRNA
GC content 0.48
exon number 11
gene id AMCG00014674
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26428681 ~ 26480278 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCTCAGAGTTGTCTGCGTTTTGTGTCTCCACAGCAAATGATGCGCTCCTCTGTGTTTCACATGTTCATCCTGAGCATGGTGGCGGTGGATGTGATTGTTGCCGCAAGCAACTACTACAAAGGGGAGACTCACCGGCAGCAATACGATGAGTTCTATCTCGCTGAGGTGGCCTTCACGGTTTTGTTTGACTTGGAGGCTCTTCTGAAGATCTGGTGCTTGGGCTTCACTGGATACATCAGCTCCTCTCTGCACAAATTTGAGTCACTGCTAGTAGTCGGCACAACCCTGCATATCTACCCAGTTCTGTATCACTCCCAGTTCACCTACTTCCAGGTCCTAAGAGTGGTACGACTGATTAAGATCTCACCAGCTCTGGAAGACTTTGTGTACAAGATTTTTGGGCCAGGGAAAAAACTGGGCAGTTTAGTTGTGTTTACAGCTAGTCTCCTCATTGTGATGTCAGCCATCAGTTTACAGATGTTCTGTTTTGTGGAAGAGCTGGACAGATTCACAACCTTTCCAAGGGCTTTCATGTCTATGTTCCAAATTCTCACCCAAGAAGGATGGGTTGACGTCATGGACCAGACTCTGGTTGCCGTGGGCCCGATGTGGGCTCCAGTGGTTGCAATTTACTTCATACTGTACCATCTTTTCGCCACGTTGATCTTGCTCAGTTTGTTTGTGGCTGTCATTTTGGACAACCTGGAGTTGGATGAAGATTTGAAAAAGCTTAAACAGCTGAAGCAGAGCGAAGCGAATGCAGACACCAAAGAGAAGCTCCCACTGCGCCTGCGCATCTTTGAGAAATTCCCCAACCGGCCACAGATGGTTAAGATCTCCAAGCTGCCCTCTGATTTCACTGTCCCTAGAATAAGGGAAAGCTTCATGAAGCAGTTCATTGATCGACAGCAGCAAGACACTAGCTGTCTGCTCCGGAGACTCCCCTccgcttcttcttcttcctgtgATCACTCAAAGAGGTCTGGAATAGAAGATAACAAATATATTGATCAAAAGttaCGAAGGTCAGTGTCCAGTATTCGTGCTCGGAATCTCTTGGAAAAGGAAACTACAATCAATAAAATCCTCCGGTCCCTGAGACATGGCTCAAACAGCCAGAGAATCAGCAGAGGAAAATCCCTGGAAACACTGACGCAGGACcacaCCAGCACTGTGAGGTACCGCAACGCGCAGAGAGAGGACAGCGAGATCAAAATGATCCAGGAGAAGAAAGAGCAGGCTGAAATGAAACGAAAAGTCCAGGAAGAAGAACTGCGAGAAAACCACCCTTACTTCGACAAGCCCCTGTTCATAGTTGGACGAGAACATCGCTTTAGAAACTTCTGCAGAGTGATAGTGCGAGCCCGCTTTAACGCGTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89858 lncRNA downstream 93681 26334655 ~ 26335000 (-) True G71882
TU89856 lncRNA downstream 104427 26324038 ~ 26324254 (-) True G71880
TU89855 lncRNA downstream 146716 26281374 ~ 26281965 (-) True G71879
TU89852 lncRNA downstream 160274 26267867 ~ 26268407 (-) True G71876
TU89851 lncRNA downstream 162465 26265731 ~ 26266216 (-) True G71875
TU89953 lncRNA upstream 451990 26932268 ~ 26932637 (-) True G71961
TU90016 lncRNA upstream 805142 27285420 ~ 27304597 (-) True AMCG00014693
TU90042 lncRNA upstream 855417 27335695 ~ 27342750 (-) False AMCG00014692
TU90058 lncRNA upstream 938538 27418816 ~ 27419045 (-) True G72049
TU90102 lncRNA upstream 1050018 27530296 ~ 27530643 (-) True G72089
AMCG00014673 mRNA downstream 152 26404082 ~ 26428529 (-) True AMCG00014673
AMCG00014671 mRNA downstream 67690 26346500 ~ 26360991 (-) True AMCG00014671
AMCG00014675 mRNA downstream 91702 26336175 ~ 26336979 (-) True AMCG00014675
AMCG00014666 mRNA downstream 268393 26154064 ~ 26160288 (-) True AMCG00014666
AMCG00014662 mRNA downstream 392854 25901904 ~ 26035827 (-) True AMCG00014662
AMCG00014672 mRNA upstream 41818 26522096 ~ 26539562 (-) True AMCG00014672
AMCG00014678 mRNA upstream 162962 26643240 ~ 26645932 (-) True AMCG00014678
AMCG00014679 mRNA upstream 200902 26681180 ~ 26698625 (-) True AMCG00014679
AMCG00014686 mRNA upstream 421943 26902221 ~ 26904187 (-) True AMCG00014686
AMCG00014688 mRNA upstream 499843 26980121 ~ 27034019 (-) True AMCG00014688
TU87063 other downstream 14766188 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 15630534 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 17111514 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 18044457 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 18270091 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 1849461 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 2909012 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 5782889 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 6117184 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 6117184 32597462 ~ 32619149 (-) False G73127

Expression Profile