RNA id: AMCG00014675


Basic Information

Item Value
RNA id AMCG00014675
length 540
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00014675
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26336175 ~ 26336979 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCAAGGATAACAGCCACCACTTTCATTCCTGTTTTACTGAATTACTGCATTCCCACCATACAAATGACGCAGATCTTTGTCTATGGGACTCTGAAGAAAGGCCAGCCGAACTACCACAGAATGCTGGACGGCGCCAACGGGAAAGCAGAGTTCTGCTGCCGGGCGCACACTGTGGAGTCGTACCCCCTGGTGATCGCGGGCAAATACAATATCCCTTTCCTCCTCAACGTCCCGGGCACCGGCTGGCAGGTCAGCGGGGAGGTGTACCGCGTGGATGGGCCGATGCTGCAGTTCCTGGACAAGTTCGAGAGCGTCCCTCAGATGTACCAGCGCACGCCAGTGAGGCTGCAGGTGGACGAGTGGGAATGTAAAACTAGTGCGTCTGAAGCTGCGCTAGCTGCTGGGAGCATCATCGAGGCCTTCGTGTACAGCACCACTACCTACCAACCCGAGTGGCTCTCCCACACCTTCTACAGCAACTATGACGCCTATGGAGACCACGGGCTGCAGTTCTGTGAACGAGAGAACAGACACTAG

Function

GO: NA

KEGG:

id description
K19761 GGACT; gamma-glutamylaminecyclotransferase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU89858 lncRNA downstream 1175 26334655 ~ 26335000 (-) True G71882
TU89856 lncRNA downstream 11921 26324038 ~ 26324254 (-) True G71880
TU89855 lncRNA downstream 54210 26281374 ~ 26281965 (-) True G71879
TU89852 lncRNA downstream 67768 26267867 ~ 26268407 (-) True G71876
TU89851 lncRNA downstream 69959 26265731 ~ 26266216 (-) True G71875
TU89953 lncRNA upstream 595289 26932268 ~ 26932637 (-) True G71961
TU90016 lncRNA upstream 948441 27285420 ~ 27304597 (-) True AMCG00014693
TU90042 lncRNA upstream 998716 27335695 ~ 27342750 (-) False AMCG00014692
TU90058 lncRNA upstream 1081837 27418816 ~ 27419045 (-) True G72049
TU90102 lncRNA upstream 1193317 27530296 ~ 27530643 (-) True G72089
AMCG00014666 mRNA downstream 175887 26154064 ~ 26160288 (-) True AMCG00014666
AMCG00014662 mRNA downstream 300348 25901904 ~ 26035827 (-) True AMCG00014662
AMCG00014663 mRNA downstream 434481 25901449 ~ 25901694 (-) True AMCG00014663
AMCG00014658 mRNA downstream 484204 25774969 ~ 25851971 (-) True AMCG00014658
AMCG00014659 mRNA downstream 572256 25753848 ~ 25763919 (-) True AMCG00014659
AMCG00014671 mRNA upstream 9521 26346500 ~ 26360991 (-) True AMCG00014671
AMCG00014673 mRNA upstream 67103 26404082 ~ 26428529 (-) True AMCG00014673
AMCG00014674 mRNA upstream 91702 26428681 ~ 26480278 (-) True AMCG00014674
AMCG00014672 mRNA upstream 185117 26522096 ~ 26539562 (-) True AMCG00014672
AMCG00014678 mRNA upstream 306261 26643240 ~ 26645932 (-) True AMCG00014678
TU87063 other downstream 14673682 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 15538028 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 17019008 9310451 ~ 9317167 (-) True AMCG00014328
TU86412 other downstream 17951951 8383285 ~ 8384224 (-) True G69156
TU86302 other downstream 18177585 8156229 ~ 8158590 (-) True AMCG00014298
TU90285 other upstream 1992760 28329739 ~ 28332482 (-) True G72236
TU90581 other upstream 3052311 29389290 ~ 29398305 (-) True G72477
TU91283 other upstream 5926188 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 6260483 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 6260483 32597462 ~ 32619149 (-) False G73127

Expression Profile