RNA id: AMCG00014709



Basic Information


Item Value
RNA id AMCG00014709
length 753
RNA type mRNA
GC content 0.55
exon number 6
gene id AMCG00014709
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28222661 ~ 28235915 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCCACTGTGTGTTGCTGGCATCCAAGGAGAACTCCGCCCCGGTGAAACTGGGTGGATTCGGAGTGGCCATACAACTTGGAGAATCTGGACTGGTTGCAGGagGCCGAGTGGGAACGCCTCATTTTATGGCCCCCGAAGTGGTGAAGAGGGAGCCCTATGGGAAGCCAGTGGACGTCTGGGGCTGCGGAGTAATTCTCTTCATTTTACTCAGCGGGTGTCTGCCGTTTTATGGGACCAAGGAAAGGCTTTTTGAAGCAATCATTAAAGGGAAATACAAGACCCCCAGGCCACCtgtaatgtgtctgtgtgcacacACTTTGCAGATGAATCCCCGGCAGTGGAGCCATATCTCGGAAAGTGCCAAAGACCTGGTACGCCGCATGTTGATGCTGGACCCCGCAGAGAGGATAACCGTGTACGAGGCCCTCAACCACCCCTGGCTCAAGGAGAGAGACCgttatgcctacaaaatccacCTCCCTGAGACAGTGGAGCAGCTGAGGAAATTCAACGCCAGAAGGAAATTAAAGGGTGCTGTTTTAGCTGCTGTTTCCAGCCATAAGTTTAACTCCTTCTATGGAGACCCACCTGAGGAGCTCCCCGACTTCTCTGAAGACCCCACTTCCTCAGGGGCGGTGTCGCAGGTGCTGGACAGTCTGGAGGAGATCCACGCCCTGACGGACTGCAGCGAGAAGGACCTGGACTTCCTGCACAGCGTGTTCCAGGACCAACACCTCCACACGCTGCTGGAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90084 lncRNA upstream 743217 27475064 ~ 27479444 (+) True G72072
TU89992 lncRNA upstream 1195389 27026775 ~ 27027272 (+) True G71995
TU89956 lncRNA upstream 1269408 26952296 ~ 26953253 (+) True G71963
TU89946 lncRNA upstream 1311424 26904877 ~ 26911237 (+) True AMCG00014687
TU89834 lncRNA upstream 1991096 26231219 ~ 26231565 (+) True G71859
TU90207 lncRNA downstream 4651 28240566 ~ 28297484 (+) True G72169
TU90212 lncRNA downstream 61754 28297669 ~ 28300813 (+) True G72173
TU90255 lncRNA downstream 101376 28337291 ~ 28341717 (+) True G72208
TU90338 lncRNA downstream 290873 28526788 ~ 28578733 (+) True G72273
TU90404 lncRNA downstream 595841 28831756 ~ 28831975 (+) True G72329
AMCG00014711 mRNA upstream 38131 28167033 ~ 28184530 (+) True AMCG00014711
AMCG00014708 mRNA upstream 303738 27891851 ~ 27918923 (+) True AMCG00014708
AMCG00014703 mRNA upstream 342906 27868715 ~ 27879755 (+) False AMCG00014703
AMCG00014706 mRNA upstream 361298 27843390 ~ 27861363 (+) True AMCG00014706
AMCG00014704 mRNA upstream 380795 27835519 ~ 27841866 (+) False AMCG00014704
AMCG00014710 mRNA downstream 15011 28250926 ~ 28280724 (+) True AMCG00014710
AMCG00014714 mRNA downstream 93882 28329797 ~ 28332468 (+) True AMCG00014714
AMCG00014721 mRNA downstream 171302 28407217 ~ 28441529 (+) True AMCG00014721
AMCG00014722 mRNA downstream 209061 28444976 ~ 28450107 (+) True AMCG00014722
AMCG00014720 mRNA downstream 220280 28456195 ~ 28483850 (+) True AMCG00014720
TU90175 other upstream 342861 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 380790 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 5367015 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 9948301 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 10774208 17403511 ~ 17448453 (+) False AMCG00014553
TU90214 other downstream 66458 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 1615535 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 2528436 30764351 ~ 30805741 (+) False AMCG00014777
TU90965 other downstream 2742301 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 2743655 30979570 ~ 30980252 (+) True G72786

Expression Profile