RNA id: AMCG00014723


Basic Information

Item Value
RNA id AMCG00014723
length 597
RNA type mRNA
GC content 0.53
exon number 4
gene id AMCG00014723
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28591078 ~ 28609187 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGTGCATAGCCTTGGAGAGATACCTGGTGGTCGCCCATCCTCTCTGGTACTGGAACCACCGCAGCGTCAGGCACACTGCATTGATCTCTGCCGGAGTTTGGGTGCTGGCTTTCATACTCATGGCAATATCGTACCTAAAAGTTTTTTCATATTTGCCAGGCTATGCATGCAGTATTCTAAGGCCAGTCCTCTTGCTCCTGCTGTTCCCCCTCctcattttcttctttgtggGTACCAAGAGAGCCATCGCTGGCACGACCTCTGTACGGGATGCAGAGAAGAGGAGGATTCTGTGCACACTGGCCTTTGTCCTGGGCACCTACATTGTGCTAATCTTGCCTAATCTCAATGTCagcaacatcatcatcattctcCAGTTAGAACTAGCCCTGCCATTGGACAGctcctgctATAAGCTGTGGAGGGCCTTGGGGGCCGAGGGCAAGCTGTTCTGCAGGCTGCTGTGGTTCCTCATTGGGAAATTGAGCACCTCCACACCCAGGGACCGGGCTGAGGATGGTATGTCGGCTGTGTGCTGGGCCGTGGCTTCTCTGCCTGACCTCTTTGATTCCACACACAGCTCCACCATCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90338 lncRNA upstream 12345 28526788 ~ 28578733 (+) True G72273
TU90255 lncRNA upstream 249361 28337291 ~ 28341717 (+) True G72208
TU90212 lncRNA upstream 290265 28297669 ~ 28300813 (+) True G72173
TU90207 lncRNA upstream 293594 28240566 ~ 28297484 (+) True G72169
TU90084 lncRNA upstream 1111634 27475064 ~ 27479444 (+) True G72072
TU90404 lncRNA downstream 222569 28831756 ~ 28831975 (+) True G72329
TU90400 lncRNA downstream 227095 28836282 ~ 28837910 (+) False AMCG00014729
TU90416 lncRNA downstream 309789 28918976 ~ 28921290 (+) True G72341
TU90428 lncRNA downstream 371935 28981122 ~ 28985576 (+) True G72353
TU90429 lncRNA downstream 380420 28989607 ~ 28991299 (+) True G72354
AMCG00014724 mRNA upstream 118 28583469 ~ 28590960 (+) True AMCG00014724
AMCG00014720 mRNA upstream 107228 28456195 ~ 28483850 (+) True AMCG00014720
AMCG00014722 mRNA upstream 140971 28444976 ~ 28450107 (+) True AMCG00014722
AMCG00014721 mRNA upstream 149549 28407217 ~ 28441529 (+) True AMCG00014721
AMCG00014714 mRNA upstream 258610 28329797 ~ 28332468 (+) True AMCG00014714
AMCG00014726 mRNA downstream 86624 28695811 ~ 28766090 (+) True AMCG00014726
AMCG00014725 mRNA downstream 158248 28767435 ~ 28779290 (+) True AMCG00014725
AMCG00014729 mRNA downstream 187862 28797049 ~ 28837909 (+) True AMCG00014729
AMCG00014727 mRNA downstream 272730 28881917 ~ 28890968 (+) True AMCG00014727
AMCG00014728 mRNA downstream 296714 28905901 ~ 28916634 (+) True AMCG00014728
TU90214 other upstream 287005 28302373 ~ 28304073 (+) True G72175
TU90175 other upstream 711278 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 749207 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 5735432 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 10316718 18271854 ~ 18274360 (+) True G71004
TU90740 other downstream 1242263 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 2155164 30764351 ~ 30805741 (+) False AMCG00014777
TU90965 other downstream 2369029 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 2370383 30979570 ~ 30980252 (+) True G72786
TU90967 other downstream 2380876 30990063 ~ 30996363 (+) True G72787