Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014736 |
| length | 531 |
| RNA type | mRNA |
| GC content | 0.57 |
| exon number | 3 |
| gene id | AMCG00014736 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 29431521 ~ 29437107 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0001654 | eye development | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| GO:0051082 | unfolded protein binding | molecular_function |
| id | description |
|---|---|
| K09541 | CRYAA; crystallin, alpha A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90544 | lncRNA | upstream | 159003 | 29268329 ~ 29272518 (+) | False | AMCG00014738 |
| TU90543 | lncRNA | upstream | 159003 | 29270851 ~ 29272518 (+) | False | AMCG00014738 |
| TU90536 | lncRNA | upstream | 178816 | 29249246 ~ 29252705 (+) | True | AMCG00014739 |
| TU90518 | lncRNA | upstream | 239243 | 29191971 ~ 29192278 (+) | True | G72426 |
| TU90507 | lncRNA | upstream | 271096 | 29157025 ~ 29160425 (+) | True | G72415 |
| TU90738 | lncRNA | downstream | 406360 | 29843467 ~ 29846586 (+) | True | AMCG00014757 |
| TU90938 | lncRNA | downstream | 1399729 | 30836836 ~ 30837169 (+) | True | G72767 |
| TU90940 | lncRNA | downstream | 1404453 | 30841560 ~ 30844670 (+) | True | G72768 |
| TU90941 | lncRNA | downstream | 1409055 | 30846162 ~ 30846421 (+) | True | G72769 |
| TU90963 | lncRNA | downstream | 1518798 | 30955905 ~ 30956284 (+) | True | G72783 |
| AMCG00014740 | mRNA | upstream | 10142 | 29400632 ~ 29421379 (+) | True | AMCG00014740 |
| AMCG00014741 | mRNA | upstream | 33300 | 29383488 ~ 29398221 (+) | True | AMCG00014741 |
| AMCG00014737 | mRNA | upstream | 109929 | 29307940 ~ 29321592 (+) | True | AMCG00014737 |
| AMCG00014738 | mRNA | upstream | 152372 | 29269638 ~ 29279149 (+) | True | AMCG00014738 |
| AMCG00014739 | mRNA | upstream | 175167 | 29247875 ~ 29256354 (+) | False | AMCG00014739 |
| AMCG00014743 | mRNA | downstream | 103424 | 29540531 ~ 29558701 (+) | True | AMCG00014743 |
| AMCG00014746 | mRNA | downstream | 151694 | 29588801 ~ 29614037 (+) | True | AMCG00014746 |
| AMCG00014745 | mRNA | downstream | 206669 | 29643776 ~ 29649810 (+) | True | AMCG00014745 |
| AMCG00014747 | mRNA | downstream | 216086 | 29653193 ~ 29657089 (+) | True | AMCG00014747 |
| AMCG00014753 | mRNA | downstream | 222437 | 29659544 ~ 29684659 (+) | True | AMCG00014753 |
| TU90214 | other | upstream | 1127448 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90175 | other | upstream | 1551721 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90165 | other | upstream | 1589650 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU89430 | other | upstream | 6575875 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU88725 | other | upstream | 11157161 | 18271854 ~ 18274360 (+) | True | G71004 |
| TU90740 | other | downstream | 414343 | 29851450 ~ 29851821 (+) | True | G72605 |
| TU90928 | other | downstream | 1327244 | 30764351 ~ 30805741 (+) | False | AMCG00014777 |
| TU90965 | other | downstream | 1541109 | 30978216 ~ 30978825 (+) | True | G72785 |
| TU90966 | other | downstream | 1542463 | 30979570 ~ 30980252 (+) | True | G72786 |
| TU90967 | other | downstream | 1552956 | 30990063 ~ 30996363 (+) | True | G72787 |
