RNA id: AMCG00014749


Basic Information

Item Value
RNA id AMCG00014749
length 1113
RNA type mRNA
GC content 0.64
exon number 1
gene id AMCG00014749
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29658273 ~ 29659385 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTAATCAGGACTGCCCTTAACCCGTGTGTTAACCCGCACTTACGCACACTGACGAGCCTTGCCCAGGAGGGTGgccggggtctggtcttgaaatcGCTGTCCACGGATGTGTATGAGAACCTGGCTTTGGAGGACTGGATTCACGACCACGTCGACTTGCAGAGCAGGACCCTGCTTTTGCTGTGGAAAAACACGCCGGCCGTCGTGATCGGCAGACACCAGAACCCCTGGCAGGAGTGCAACCTGAGGCTGATGCGGGACAGGGGCGTAGCGTTGGCCAGGAGGCGCAGCGGCGGCGGGACGGTGTACCACGACCTGGGCAACATCAACATGACCTTCTTCACGTCCAGGAAGAAATACGACCGGGTGAGGAATCTGAGGGTGGTGACCAGCGCGCTGCAGCAGCTCCGACCCGGCCTCGACGTGCGGGCGACGGAAAGATTTGACATCCTGCTGAACGGGGGGTACAAAATCTCGGGCACCGCCGCCAAACTGGGCCGGGTCTCCGCCTACCACCACTGTACCCTGCTGTGCGGCTCCGACCGGTCCCTGCTCTCGGCCGTGCTGAGAAGCTCCTGTCAGGGAATCCAGAGCAACGCCACCCCGAGCGTGCCTTCCCCGGTGAAGAACCTGCAGGATGAAGACCCCAGCTTAGACTGCCGGGCCGTCATGGACGCGGTGGCGGCGGAGTACAGCGCGCAGTACGGCTTGGACCACCGTGTCTCGGACATCGACCCGACTGATGAGATCTCTCTGCCGGGTATACGTCGGATGGCTCAGGACTTAAAGACCTGGGAGTGGGTGTACGGGAAGACGCCGAAATTCAGCGTCAGGAGCGGTTTTGAGGTGCGCGACGGGAGCTCCAGCAGCAGCGCCGCGCTGAGGATGGGCGTGAGGAACGGCCTGATCGAGTCGTGCCGCGTCGAGCTGCCCGCGGACTGGCTGCCGGCTGCCCTGTGCGACGAGCTGGCCGCGCAGCTGATCGGCGGCAGGTTCTGTCCCGGCGAGACCGCGGTGCTGACGGCCGCCGTGCTCAGGACGTGTCCGCAGGGCAGCGAGATCCGAAACAAGTGGAATATCCTGTGCGACAGCGTGGCTGCGGTCATGTGa

Function

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K10105 LIPT1; lipoyltransferase 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90650 lncRNA downstream 8631 29647588 ~ 29649642 (-) True G72530
TU90655 lncRNA downstream 96207 29560538 ~ 29562066 (-) True G72535
TU90604 lncRNA downstream 234901 29421260 ~ 29423372 (-) True G72495
TU90580 lncRNA downstream 259968 29395486 ~ 29398305 (-) False G72477
TU90574 lncRNA downstream 306619 29350078 ~ 29351654 (-) True G72472
TU90712 lncRNA upstream 79822 29739207 ~ 29743212 (-) True G72581
TU90767 lncRNA upstream 287332 29946717 ~ 29947061 (-) True G72629
TU90785 lncRNA upstream 309270 29968655 ~ 29982575 (-) True G72642
TU90789 lncRNA upstream 394955 30054340 ~ 30055173 (-) True G72646
TU90803 lncRNA upstream 507332 30166717 ~ 30166926 (-) True G72659
AMCG00014750 mRNA downstream 6964 29650438 ~ 29651309 (-) True AMCG00014750
AMCG00014748 mRNA downstream 14570 29615521 ~ 29643703 (-) True AMCG00014748
AMCG00014744 mRNA downstream 151212 29490065 ~ 29507061 (-) True AMCG00014744
AMCG00014742 mRNA downstream 194397 29454042 ~ 29463876 (-) True AMCG00014742
AMCG00014735 mRNA downstream 274825 29351748 ~ 29383448 (-) True AMCG00014735
AMCG00014756 mRNA upstream 175866 29835251 ~ 29841157 (-) True AMCG00014756
AMCG00014755 mRNA upstream 184039 29843424 ~ 29852958 (-) True AMCG00014755
AMCG00014759 mRNA upstream 255870 29915255 ~ 29940883 (-) True AMCG00014759
AMCG00014758 mRNA upstream 290646 29950031 ~ 29951305 (-) True AMCG00014758
AMCG00014762 mRNA upstream 552753 30212138 ~ 30217061 (-) True AMCG00014762
TU90581 other downstream 259968 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 1325791 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 17995780 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 18860126 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 20341106 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 2603782 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 2938077 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 2938077 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 3142473 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 5110198 34769583 ~ 34769979 (-) True G73328

Expression Profile