RNA id: AMCG00014750


Basic Information

Item Value
RNA id AMCG00014750
length 378
RNA type mRNA
GC content 0.53
exon number 3
gene id AMCG00014750
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29650438 ~ 29651309 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGCTTGTTGCTTTGCCTCCTGAGGTGTATGAAGAACGGGCTAAAGAGCACGACAAGTATGGTGGGGACCCTGAGCAGCCACACAAATTGCACCTCATCACCAGGATAAAGAGCACCATGCGACGGCCCTACTGGGAAAAGAAAGTTGTGCAGGATCTGGGACTAGGCAAGgCACATCAGCCCCGTGTGCACAAAAACATTCCTTCTGTCAACAACAAGCTAAAAATCATAAAGCACCTTGTGAGGATCCAGCCCCTGAAGCTGCCCCACGGACTGCCAGCAGAGGAGGAGCTGGCAGACACCTTTGTGAAGAGCACCGGGGAGTTGGTTGTAAGACGTCGCCTGCAGCCCCTGGAACAAAAAGCCATCGAATCGTAG

Function

GO:

id name namespace
GO:0006412 translation biological_process
GO:0015934 large ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02907 RP-L30, MRPL30, rpmD; large subunit ribosomal protein L30

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90650 lncRNA downstream 796 29647588 ~ 29649642 (-) True G72530
TU90655 lncRNA downstream 88372 29560538 ~ 29562066 (-) True G72535
TU90604 lncRNA downstream 227066 29421260 ~ 29423372 (-) True G72495
TU90580 lncRNA downstream 252133 29395486 ~ 29398305 (-) False G72477
TU90574 lncRNA downstream 298784 29350078 ~ 29351654 (-) True G72472
TU90712 lncRNA upstream 87898 29739207 ~ 29743212 (-) True G72581
TU90767 lncRNA upstream 295408 29946717 ~ 29947061 (-) True G72629
TU90785 lncRNA upstream 317346 29968655 ~ 29982575 (-) True G72642
TU90789 lncRNA upstream 403031 30054340 ~ 30055173 (-) True G72646
TU90803 lncRNA upstream 515408 30166717 ~ 30166926 (-) True G72659
AMCG00014748 mRNA downstream 6735 29615521 ~ 29643703 (-) True AMCG00014748
AMCG00014744 mRNA downstream 143377 29490065 ~ 29507061 (-) True AMCG00014744
AMCG00014742 mRNA downstream 186562 29454042 ~ 29463876 (-) True AMCG00014742
AMCG00014735 mRNA downstream 266990 29351748 ~ 29383448 (-) True AMCG00014735
AMCG00014732 mRNA downstream 618530 29023778 ~ 29031908 (-) True AMCG00014732
AMCG00014749 mRNA upstream 6964 29658273 ~ 29659385 (-) True AMCG00014749
AMCG00014756 mRNA upstream 183942 29835251 ~ 29841157 (-) True AMCG00014756
AMCG00014755 mRNA upstream 192115 29843424 ~ 29852958 (-) True AMCG00014755
AMCG00014759 mRNA upstream 263946 29915255 ~ 29940883 (-) True AMCG00014759
AMCG00014758 mRNA upstream 298722 29950031 ~ 29951305 (-) True AMCG00014758
TU90581 other downstream 252133 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 1317956 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 17987945 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 18852291 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 20333271 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 2611858 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 2946153 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 2946153 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 3150549 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 5118274 34769583 ~ 34769979 (-) True G73328

Expression Profile