RNA id: AMCG00014769


Basic Information

Item Value
RNA id AMCG00014769
length 357
RNA type mRNA
GC content 0.47
exon number 3
gene id AMCG00014769
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30525993 ~ 30531499 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCCATTCACTCCGTCAGCTGGCATCACGAAGGAAAACAGTTCATGTGCAGCCATTCAGATGGTAGTCTGACGATGTGGAATATGAAGAACACAGCCAAACCCTTCCAAATCACATTCCCACATGGGAAGAACCAGCGAGACGGGAAGAAACCAGAACCTTGCAAACCGATCCTGAAGGTGGAGTACAAAACATGCAAAAGCAGTGAGCCATTTATAATCTTCTCTGGAGGGCTGTCGTATGACAAAGCTTGTCGAAGACCCAGCCTGACAATCATGCATGGCAAATCCATCACAGTGTTGGAGATGGATCATCCCATAGTGGAATTCCTAACACTTTGTGAGACTCCCTATCCTAAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90738 lncRNA upstream 679407 29843467 ~ 29846586 (+) True AMCG00014757
TU90544 lncRNA upstream 1253475 29268329 ~ 29272518 (+) False AMCG00014738
TU90543 lncRNA upstream 1253475 29270851 ~ 29272518 (+) False AMCG00014738
TU90536 lncRNA upstream 1273288 29249246 ~ 29252705 (+) True AMCG00014739
TU90518 lncRNA upstream 1333715 29191971 ~ 29192278 (+) True G72426
TU90938 lncRNA downstream 305337 30836836 ~ 30837169 (+) True G72767
TU90940 lncRNA downstream 310061 30841560 ~ 30844670 (+) True G72768
TU90941 lncRNA downstream 314663 30846162 ~ 30846421 (+) True G72769
TU90963 lncRNA downstream 424406 30955905 ~ 30956284 (+) True G72783
TU90969 lncRNA downstream 471873 31003372 ~ 31003788 (+) True G72789
AMCG00014767 mRNA upstream 275727 30241706 ~ 30250266 (+) True AMCG00014767
AMCG00014776 mRNA upstream 314162 30197763 ~ 30211831 (+) True AMCG00014776
AMCG00014773 mRNA upstream 343596 30175067 ~ 30182397 (+) True AMCG00014773
AMCG00014778 mRNA upstream 353987 30161978 ~ 30172006 (+) True AMCG00014778
AMCG00014760 mRNA upstream 383039 30099986 ~ 30142954 (+) True AMCG00014760
AMCG00014770 mRNA downstream 13714 30545213 ~ 30548522 (+) True AMCG00014770
AMCG00014772 mRNA downstream 62630 30594129 ~ 30610104 (+) True AMCG00014772
AMCG00014779 mRNA downstream 128102 30659601 ~ 30660595 (+) True AMCG00014779
AMCG00014774 mRNA downstream 168707 30700206 ~ 30710420 (+) True AMCG00014774
AMCG00014768 mRNA downstream 196864 30728363 ~ 30741144 (+) True AMCG00014768
TU90740 other upstream 674172 29851450 ~ 29851821 (+) True G72605
TU90214 other upstream 2221920 28302373 ~ 28304073 (+) True G72175
TU90175 other upstream 2646193 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 2684122 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 7670347 22855342 ~ 22855646 (+) True G71525
TU90928 other downstream 232852 30764351 ~ 30805741 (+) False AMCG00014777
TU90965 other downstream 446717 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 448071 30979570 ~ 30980252 (+) True G72786
TU90967 other downstream 458564 30990063 ~ 30996363 (+) True G72787
TU91144 other downstream 1185619 31717118 ~ 31754930 (+) True G72925

Expression Profile