RNA id: AMCG00014773



Basic Information


Item Value
RNA id AMCG00014773
length 663
RNA type mRNA
GC content 0.41
exon number 4
gene id AMCG00014773
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30175067 ~ 30182397 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TTTTTCCTGTTGAATGCATACAAAGGATACTACTAAAGACCCTTATATGTTGTTAAGCTTTTCTCAGCAACTGCAAACTCAGTATGTTCCAGTacgtcttctgttttcttttcctatATTTGCTGTCTCCAGCAGGAGCGTTTGATGGCTACATCATTGGAGGGAAGGAGGCAAAGCCACACTCCCGACCGTACATGGCTTCACTGCAGATAGATGGACACCATGTCTGTGGAGGATTCCTGGTTCGAGAAGACTTTGTCTTGACAGCGGCACACTGCTACAAAAATAAGCCCATCACTGTGGTTCTGGGTGCCCATAACGTAAGGAAGCATGAGAAGTCCCAGCAGAGGATAGAAGTGAAAAAATATCATAAACATGGTTTAAAGTCCTTAAGTCAGTTTGATTTCGACATTATGTTACTGAAGGGAGACTCCGGGGGACCTCTGATTTGTAAATCAAAAGCACTAGGTCTGGCTTTGTACACTGCGCAGAGGTGCGACGACTCCGATTATCCACAGGTTTACTTAAATGTTTCACGTTACCTGCCatggataaaaaaaactatgaaaacaaaaaaagagatgCCTTGAAGAATCTGTATGGCCACTGAAAGATGCATCAgcaagttaaaataatacaaattaaaataaataaaatgctcgC

Function


GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90738 lncRNA upstream 328481 29843467 ~ 29846586 (+) True AMCG00014757
TU90544 lncRNA upstream 902549 29268329 ~ 29272518 (+) False AMCG00014738
TU90543 lncRNA upstream 902549 29270851 ~ 29272518 (+) False AMCG00014738
TU90536 lncRNA upstream 922362 29249246 ~ 29252705 (+) True AMCG00014739
TU90518 lncRNA upstream 982789 29191971 ~ 29192278 (+) True G72426
TU90938 lncRNA downstream 654439 30836836 ~ 30837169 (+) True G72767
TU90940 lncRNA downstream 659163 30841560 ~ 30844670 (+) True G72768
TU90941 lncRNA downstream 663765 30846162 ~ 30846421 (+) True G72769
TU90963 lncRNA downstream 773508 30955905 ~ 30956284 (+) True G72783
TU90969 lncRNA downstream 820975 31003372 ~ 31003788 (+) True G72789
AMCG00014778 mRNA upstream 3061 30161978 ~ 30172006 (+) True AMCG00014778
AMCG00014760 mRNA upstream 32113 30099986 ~ 30142954 (+) True AMCG00014760
AMCG00014761 mRNA upstream 80855 30093412 ~ 30094212 (+) True AMCG00014761
AMCG00014757 mRNA upstream 330990 29843590 ~ 29844077 (+) False AMCG00014757
AMCG00014754 mRNA upstream 345076 29787726 ~ 29829991 (+) True AMCG00014754
AMCG00014776 mRNA downstream 15366 30197763 ~ 30211831 (+) True AMCG00014776
AMCG00014767 mRNA downstream 59309 30241706 ~ 30250266 (+) True AMCG00014767
AMCG00014769 mRNA downstream 343596 30525993 ~ 30531499 (+) True AMCG00014769
AMCG00014770 mRNA downstream 362816 30545213 ~ 30548522 (+) True AMCG00014770
AMCG00014772 mRNA downstream 411732 30594129 ~ 30610104 (+) True AMCG00014772
TU90740 other upstream 323246 29851450 ~ 29851821 (+) True G72605
TU90214 other upstream 1870994 28302373 ~ 28304073 (+) True G72175
TU90175 other upstream 2295267 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 2333196 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 7319421 22855342 ~ 22855646 (+) True G71525
TU90928 other downstream 581954 30764351 ~ 30805741 (+) False AMCG00014777
TU90965 other downstream 795819 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 797173 30979570 ~ 30980252 (+) True G72786
TU90967 other downstream 807666 30990063 ~ 30996363 (+) True G72787
TU91144 other downstream 1534721 31717118 ~ 31754930 (+) True G72925

Expression Profile