RNA id: TU90928



Basic Information


Item Value
RNA id TU90928
length 281
RNA type TUCP
GC content 0.49
exon number 3
gene id AMCG00014777
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30764351 ~ 30812287 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


gaAATGGCATTGTGGTTCAGTGGCAAGAATCCAGGGTTTGCCTCTCAAAGCACAACAAATCAGGAGAATTTTAGTGATGGAAACACAGAACAACACAGAGTCCTACATAACTACTTTGATGTGAAAGTTCGACCCTTCATTGACCTCATCGACTCCCTGAGATACCATGGCATTGAGAAAGATCTGAATCTGCCCGCTATCGCTGTGATTGGGGATCAGAGCTCAGGAAAGAGCTCAGTGCTGGAGGCTCTGTCTGGAGTGCCGCTGCCCAGAGGGAGTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU90738 lncRNA upstream 917765 29843467 ~ 29846586 (+) True AMCG00014757
TU90544 lncRNA upstream 1491833 29268329 ~ 29272518 (+) False AMCG00014738
TU90543 lncRNA upstream 1491833 29270851 ~ 29272518 (+) False AMCG00014738
TU90536 lncRNA upstream 1511646 29249246 ~ 29252705 (+) True AMCG00014739
TU90518 lncRNA upstream 1572073 29191971 ~ 29192278 (+) True G72426
TU90938 lncRNA downstream 31095 30836836 ~ 30837169 (+) True G72767
TU90940 lncRNA downstream 35819 30841560 ~ 30844670 (+) True G72768
TU90941 lncRNA downstream 40421 30846162 ~ 30846421 (+) True G72769
TU90963 lncRNA downstream 150164 30955905 ~ 30956284 (+) True G72783
TU90969 lncRNA downstream 197631 31003372 ~ 31003788 (+) True G72789
AMCG00014768 mRNA upstream 23207 30728363 ~ 30741144 (+) True AMCG00014768
AMCG00014774 mRNA upstream 53931 30700206 ~ 30710420 (+) True AMCG00014774
AMCG00014779 mRNA upstream 103756 30659601 ~ 30660595 (+) True AMCG00014779
AMCG00014772 mRNA upstream 154247 30594129 ~ 30610104 (+) True AMCG00014772
AMCG00014770 mRNA upstream 215829 30545213 ~ 30548522 (+) True AMCG00014770
AMCG00014771 mRNA downstream 41431 30847172 ~ 30851142 (+) True AMCG00014771
AMCG00014781 mRNA downstream 101428 30907169 ~ 30917566 (+) True AMCG00014781
AMCG00014784 mRNA downstream 217802 31023543 ~ 31027002 (+) True AMCG00014784
AMCG00014783 mRNA downstream 236150 31041891 ~ 31044741 (+) True AMCG00014783
AMCG00014786 mRNA downstream 340028 31145769 ~ 31146137 (+) False AMCG00014786
TU90740 other upstream 912530 29851450 ~ 29851821 (+) True G72605
TU90214 other upstream 2460278 28302373 ~ 28304073 (+) True G72175
TU90175 other upstream 2884551 27868703 ~ 27879800 (+) True AMCG00014703
TU90165 other upstream 2922480 27835503 ~ 27841871 (+) True AMCG00014704
TU89430 other upstream 7908705 22855342 ~ 22855646 (+) True G71525
TU90965 other downstream 172475 30978216 ~ 30978825 (+) True G72785
TU90966 other downstream 173829 30979570 ~ 30980252 (+) True G72786
TU90967 other downstream 184322 30990063 ~ 30996363 (+) True G72787
TU91144 other downstream 911377 31717118 ~ 31754930 (+) True G72925
TU91344 other downstream 1736769 32542510 ~ 32561489 (+) True G73103

Expression Profile