Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014778 |
| length | 271 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 4 |
| gene id | AMCG00014778 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 30161978 ~ 30172006 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0003677 | DNA binding | molecular_function |
| id | description |
|---|---|
| K10849 | ERCC1; DNA excision repair protein ERCC-1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU90738 | lncRNA | upstream | 315392 | 29843467 ~ 29846586 (+) | True | AMCG00014757 |
| TU90544 | lncRNA | upstream | 889460 | 29268329 ~ 29272518 (+) | False | AMCG00014738 |
| TU90543 | lncRNA | upstream | 889460 | 29270851 ~ 29272518 (+) | False | AMCG00014738 |
| TU90536 | lncRNA | upstream | 909273 | 29249246 ~ 29252705 (+) | True | AMCG00014739 |
| TU90518 | lncRNA | upstream | 969700 | 29191971 ~ 29192278 (+) | True | G72426 |
| TU90938 | lncRNA | downstream | 664830 | 30836836 ~ 30837169 (+) | True | G72767 |
| TU90940 | lncRNA | downstream | 669554 | 30841560 ~ 30844670 (+) | True | G72768 |
| TU90941 | lncRNA | downstream | 674156 | 30846162 ~ 30846421 (+) | True | G72769 |
| TU90963 | lncRNA | downstream | 783899 | 30955905 ~ 30956284 (+) | True | G72783 |
| TU90969 | lncRNA | downstream | 831366 | 31003372 ~ 31003788 (+) | True | G72789 |
| AMCG00014760 | mRNA | upstream | 19024 | 30099986 ~ 30142954 (+) | True | AMCG00014760 |
| AMCG00014761 | mRNA | upstream | 67766 | 30093412 ~ 30094212 (+) | True | AMCG00014761 |
| AMCG00014757 | mRNA | upstream | 317901 | 29843590 ~ 29844077 (+) | False | AMCG00014757 |
| AMCG00014754 | mRNA | upstream | 331987 | 29787726 ~ 29829991 (+) | True | AMCG00014754 |
| AMCG00014751 | mRNA | upstream | 422335 | 29735891 ~ 29739643 (+) | True | AMCG00014751 |
| AMCG00014773 | mRNA | downstream | 3061 | 30175067 ~ 30182397 (+) | True | AMCG00014773 |
| AMCG00014776 | mRNA | downstream | 25757 | 30197763 ~ 30211831 (+) | True | AMCG00014776 |
| AMCG00014767 | mRNA | downstream | 69700 | 30241706 ~ 30250266 (+) | True | AMCG00014767 |
| AMCG00014769 | mRNA | downstream | 353987 | 30525993 ~ 30531499 (+) | True | AMCG00014769 |
| AMCG00014770 | mRNA | downstream | 373207 | 30545213 ~ 30548522 (+) | True | AMCG00014770 |
| TU90740 | other | upstream | 310157 | 29851450 ~ 29851821 (+) | True | G72605 |
| TU90214 | other | upstream | 1857905 | 28302373 ~ 28304073 (+) | True | G72175 |
| TU90175 | other | upstream | 2282178 | 27868703 ~ 27879800 (+) | True | AMCG00014703 |
| TU90165 | other | upstream | 2320107 | 27835503 ~ 27841871 (+) | True | AMCG00014704 |
| TU89430 | other | upstream | 7306332 | 22855342 ~ 22855646 (+) | True | G71525 |
| TU90928 | other | downstream | 592345 | 30764351 ~ 30805741 (+) | False | AMCG00014777 |
| TU90965 | other | downstream | 806210 | 30978216 ~ 30978825 (+) | True | G72785 |
| TU90966 | other | downstream | 807564 | 30979570 ~ 30980252 (+) | True | G72786 |
| TU90967 | other | downstream | 818057 | 30990063 ~ 30996363 (+) | True | G72787 |
| TU91144 | other | downstream | 1545112 | 31717118 ~ 31754930 (+) | True | G72925 |
