RNA id: AMCG00014780


Basic Information

Item Value
RNA id AMCG00014780
length 345
RNA type mRNA
GC content 0.46
exon number 4
gene id AMCG00014780
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30759157 ~ 30763061 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTGCACCGTGAGACTTGTTATATGCATTGTAACCAGGTGTCCTCTGGAGCTGAAGCTGAGAAGGGCAAAGATAGCTGGTGATTGGAGTGCAAAGATCAGCTACGATGGCAACTCTGAAGAGATCAGTGATCCCTTAGAGGTAGAGGAGTATATTTGTAAAGCCCAAAATGATCTGGCTGGGGATGGTGTTGGCATTTGTGCTGAGTTAATCAGACTGGAAATAACATCCAGCGAAGTCTCTGACTTAACCCTCATTGATCTGCCTGGGATCGCAAGAGTACCTGTGAAAGGTCAGCCAGAAGACATTGGCCAGCAGCTGGTATCAATTGAAATCATAGAATGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90845 lncRNA downstream 363819 30395139 ~ 30395338 (-) True G72693
TU90837 lncRNA downstream 497553 30261337 ~ 30261604 (-) True G72685
TU90829 lncRNA downstream 547761 30211142 ~ 30211396 (-) True G72680
TU90803 lncRNA downstream 592231 30166717 ~ 30166926 (-) True G72659
TU90789 lncRNA downstream 703984 30054340 ~ 30055173 (-) True G72646
TU90943 lncRNA upstream 78462 30841523 ~ 30844128 (-) False AMCG00014775
TU90944 lncRNA upstream 78462 30841523 ~ 30844948 (-) True AMCG00014775
TU90970 lncRNA upstream 183029 30946090 ~ 30947343 (-) True G72790
TU90971 lncRNA upstream 187049 30950110 ~ 30951375 (-) True G72791
TU91053 lncRNA upstream 699118 31462179 ~ 31463783 (-) True G72862
AMCG00014766 mRNA downstream 63832 30689042 ~ 30695325 (-) True AMCG00014766
AMCG00014765 mRNA downstream 70120 30668526 ~ 30689037 (-) True AMCG00014765
AMCG00014764 mRNA downstream 112818 30630436 ~ 30646339 (-) True AMCG00014764
AMCG00014763 mRNA downstream 131810 30620505 ~ 30627347 (-) True AMCG00014763
AMCG00014762 mRNA downstream 542096 30212138 ~ 30217061 (-) True AMCG00014762
AMCG00014775 mRNA upstream 78981 30842042 ~ 30846800 (-) False AMCG00014775
AMCG00014782 mRNA upstream 159294 30922355 ~ 30925207 (-) True AMCG00014782
AMCG00014785 mRNA upstream 189410 30952471 ~ 30979877 (-) True AMCG00014785
AMCG00014791 mRNA upstream 498655 31261716 ~ 31279130 (-) True AMCG00014791
AMCG00014790 mRNA upstream 516253 31279314 ~ 31292735 (-) True AMCG00014790
TU90581 other downstream 1360852 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 2426675 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 19096664 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 19961010 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 21441990 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 1500106 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 1834401 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 1834401 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 2038797 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 4006522 34769583 ~ 34769979 (-) True G73328

Expression Profile