RNA id: AMCG00014804



Basic Information


Item Value
RNA id AMCG00014804
length 710
RNA type mRNA
GC content 0.55
exon number 4
gene id AMCG00014804
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31753276 ~ 31763835 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCAATGGGGAGGGCAGCTTGCCCCTCTGGCTCAAGTCGCTGATGACACTGTGCTGCTTTGTGAAGGACTGCCATGTACAGAATGTGGCCATCTCCACTCTGCTGGAGCTGGTCAACCACTCCCAGTCACTGGCCCTGGTCATCGAGGACAAGAACCGGCGCTACAAGATCTCCGACAATAACCCCTTCTGTGGCCGTCTGCAGATGGTCACTGTGCCGCCCATCAACCCTGGGGTCCTCCGAATCATTGCAGAGAAAACCGACTTCTATCCCCGTGTGGCCCAGGTACTGTGGAATCAGCTGAACATGAGGAACCGGGAGCATCACATCACTAGTGTGGAGCTCTTCTATAAACTGCACTGCCTGGCTCCTTCCGCCAGCATCTGTGAGGACATTATCTGTCTGGCTCTGTTGCACAGGGACAAGGGAAGCAGACTGGAAGCCCTATTTAGATTCTCGGTACTGTGGCACCTGACTAGGGAAATTCAGAGCAGTAGGACCATGTCGCTGAACCGGTCCTTTGATAGGTTTCTGTTTGTGGTGCTGGACAGTCTAAACAGCCAGGACGGCTCCATCAGCGCTGCGGCTCAGAACTGGCTGGTCCGTGCCTTCTCTCTGAATGATGTGGTGCGCATCCTGGAGCCAGTCCTACTGCTGCTCCTCCACCCAACCCAACCCAAAACTCCTCCATTGCATGCATCAAGCAGAACC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91145 lncRNA upstream 6376 31745523 ~ 31746900 (+) True G72926
TU91127 lncRNA upstream 49703 31703146 ~ 31703573 (+) True G72912
TU91126 lncRNA upstream 50841 31702162 ~ 31702435 (+) True G72911
TU91076 lncRNA upstream 161171 31524315 ~ 31592105 (+) True G72875
TU91067 lncRNA upstream 230089 31520346 ~ 31523187 (+) True AMCG00014793
TU91158 lncRNA downstream 27066 31790901 ~ 31792354 (+) False AMCG00014799
TU91238 lncRNA downstream 192417 31956252 ~ 31962969 (+) True AMCG00014811
TU91249 lncRNA downstream 202087 31965922 ~ 31966189 (+) True G73017
TU91250 lncRNA downstream 203521 31967356 ~ 31969205 (+) True G73018
TU91254 lncRNA downstream 208150 31971985 ~ 31995538 (+) True G73019
AMCG00014798 mRNA upstream 11926 31727286 ~ 31741350 (+) True AMCG00014798
AMCG00014801 mRNA upstream 43757 31707248 ~ 31709519 (+) True AMCG00014801
AMCG00014800 mRNA upstream 57103 31681531 ~ 31696173 (+) True AMCG00014800
AMCG00014793 mRNA upstream 232872 31512808 ~ 31520404 (+) False AMCG00014793
AMCG00014792 mRNA upstream 422601 31312973 ~ 31330675 (+) True AMCG00014792
AMCG00014805 mRNA downstream 345 31764180 ~ 31765038 (+) True AMCG00014805
AMCG00014803 mRNA downstream 2229 31766064 ~ 31769661 (+) True AMCG00014803
AMCG00014799 mRNA downstream 27118 31790953 ~ 31798463 (+) True AMCG00014799
AMCG00014802 mRNA downstream 39095 31802930 ~ 31825314 (+) True AMCG00014802
AMCG00014807 mRNA downstream 101296 31865131 ~ 31890448 (+) True AMCG00014807
TU90967 other upstream 756913 30990063 ~ 30996363 (+) True G72787
TU90966 other upstream 773024 30979570 ~ 30980252 (+) True G72786
TU90965 other upstream 774451 30978216 ~ 30978825 (+) True G72785
TU90928 other upstream 947535 30764351 ~ 30805741 (+) False AMCG00014777
TU90740 other upstream 1901455 29851450 ~ 29851821 (+) True G72605
TU91344 other downstream 778675 32542510 ~ 32561489 (+) True G73103
TU91511 other downstream 1600920 33364755 ~ 33366100 (+) True G73244
TU91569 other downstream 2475099 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 3016287 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 3178176 34942011 ~ 34960447 (+) True G73343

Expression Profile