RNA id: AMCG00014836



Basic Information


Item Value
RNA id AMCG00014836
length 609
RNA type mRNA
GC content 0.43
exon number 4
gene id AMCG00014836
representative False

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35390634 ~ 35412587 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ACTGGAGAAGTTGTGGAAGAGACTGCATGCCAGGGGATTACAGAGAGAAAGTGTGACCTCACAAAGCTGTTGTCAGTTTTCGGTCAATACAATTTCAAAGTGAGAGCAGAGCAGGGGATTTTCACATCCCCGTGGGTGCAGAGTCCACGTTTCTCATTGGAATTGAACACAACTATCGGACCTCCCTCACAGGTGTCTGTAGATACTGCAAATGGTTTTTTGCATGTACAACTTCAGGATCCTGTGACtaactttaaaaacaagacTCTGGAAGATACTGAGACCACAGAAGAAGTAAACCAGCGAACATTTGCATTAACAAAACTGCAGTCCTGGACAAAGTACTGTGTTCAAGCTCAGGTGTTTATTAAAGCATACAACAAACGAGGAGAGTATAGCAAAGCAGTCTGTAAGACTACCACAACCAAtggtaaagcattttttttggCAGTCAGCTATAAATATTTGACAGATCCTCCACACTCCTATGTGTTCTTGGCCATGCAGAATCCAAATGAACCAGAGGAGATGTGCAACGAGATCAGCATTGTGTGTGAAGAGTCAGAGACCATTGAGATGGGAGAGAACACTCAGAAAAGTGGAGTGGTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91667 lncRNA upstream 126229 35267644 ~ 35268081 (+) True G73380
TU91660 lncRNA upstream 138195 35253869 ~ 35256115 (+) True G73374
TU91642 lncRNA upstream 225104 35168949 ~ 35169206 (+) True G73356
TU91640 lncRNA upstream 315414 35078659 ~ 35078896 (+) True G73354
TU91606 lncRNA upstream 624352 34769583 ~ 34769958 (+) True G73327
TU91721 lncRNA downstream 59988 35472060 ~ 35476459 (+) True G73427
TU91732 lncRNA downstream 85125 35497197 ~ 35502434 (+) True G73431
TU91765 lncRNA downstream 259706 35671778 ~ 35672050 (+) True G73462
TU91767 lncRNA downstream 262901 35674973 ~ 35684158 (+) True G73463
TU91776 lncRNA downstream 328463 35740535 ~ 35742847 (+) True G73471
AMCG00014835 mRNA upstream 11407 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014833 mRNA upstream 73328 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014831 mRNA upstream 462450 34691085 ~ 34931860 (+) True AMCG00014831
AMCG00014827 mRNA upstream 1616062 33697523 ~ 33778248 (+) True AMCG00014827
AMCG00014822 mRNA upstream 2625331 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014834 mRNA downstream 51929 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014837 mRNA downstream 139085 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014848 mRNA downstream 883644 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014850 mRNA downstream 1205593 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 1501328 36913400 ~ 36914503 (+) True AMCG00014852
TU91622 other upstream 433863 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 613720 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 1154910 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 2028210 33364755 ~ 33366100 (+) True G73244
TU91344 other upstream 2832821 32542510 ~ 32561489 (+) True G73103
TU92227 other downstream 2106036 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 3020302 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 3398621 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 3924196 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 4194815 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile