RNA id: AMCG00014837



Basic Information


Item Value
RNA id AMCG00014837
length 651
RNA type mRNA
GC content 0.48
exon number 1
gene id AMCG00014837
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35551157 ~ 35551807 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGTCAGCACAACAGCTGGGAGTGCGGGTCTCTGAAACTGAAACCTGTGTATCGgatctgcaagacaaatttcaAGTGAAAGGGCCTGTCATTGACTCGCTAGTGCAGAAAATGGAGCTGATGCAGGAAAAAATttcaaacattgaaaacaagggACGCCGAAAGAACATTAGGATCGCTGGTATCCCTGAAAACGCAGAAGGGCGTGATATGACCAGCTTTCTGAACTCACTTCTACACGACTGCCTGGGTCTCAATATTGACAGCATGTTTGAGATCGAGCGAGCGCACAGATCTCTCGGCCCAAGATCCAGTCAAGGAGGCTGCCCTCGTCAAATTATAGTGCGCTTTCTGCACTACAGTGCAAGGGAGGCTGTGCTATGGGCTGCCAGGGAGAAGGGTGGAACAGAATGGCGAAACAACcgtgtgtttttcttccaggatttgtCACAAGATGTGATGCTGAGACGTAGGAAGGTTGATGAGGTTAAGCGATCATTACAGGAGAAGGGCATAAAGTATGCAATGCTCTACCCAGCGATCATGAAAATTTCGGTCAACCGCAAAAATATTCTTTCAGCTGTGCCGGGATCGGAATCTTCGCGGGGCATCTGCCGGACGAGTTTGAACTTTGGGATTGATTTCGTGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91732 lncRNA upstream 48723 35497197 ~ 35502434 (+) True G73431
TU91721 lncRNA upstream 74698 35472060 ~ 35476459 (+) True G73427
TU91689 lncRNA upstream 138570 35390634 ~ 35412587 (+) True AMCG00014836
TU91667 lncRNA upstream 283076 35267644 ~ 35268081 (+) True G73380
TU91660 lncRNA upstream 295042 35253869 ~ 35256115 (+) True G73374
TU91765 lncRNA downstream 119971 35671778 ~ 35672050 (+) True G73462
TU91767 lncRNA downstream 123166 35674973 ~ 35684158 (+) True G73463
TU91776 lncRNA downstream 188728 35740535 ~ 35742847 (+) True G73471
TU91836 lncRNA downstream 545473 36097280 ~ 36097948 (+) True G73525
TU91947 lncRNA downstream 642243 36194050 ~ 36194315 (+) True G73608
AMCG00014834 mRNA upstream 76788 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 139085 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 168254 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014833 mRNA upstream 230175 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014831 mRNA upstream 619297 34691085 ~ 34931860 (+) True AMCG00014831
AMCG00014848 mRNA downstream 743909 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014850 mRNA downstream 1065858 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 1361593 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 1448823 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 2144853 37696660 ~ 37706352 (+) True AMCG00014862
TU91690 other upstream 156508 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 590710 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 770567 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 1311757 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 2185057 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 1966301 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 2880567 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 3258886 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 3784461 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 4055080 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile