RNA id: AMCG00014843



Basic Information


Item Value
RNA id AMCG00014843
length 381
RNA type mRNA
GC content 0.49
exon number 4
gene id AMCG00014843
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36062619 ~ 36073308 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGATCTTCTCCATGCTATGGGGCCAGACACTGTTGTGATAACCAGTTCAGACCTGCCTTCCTCTCTAGGAGAAAACTATCTGATTGCACTTGGGAGCCAAAAGAAGATTAAGCCTGATGGCACAAAGGTGACCCAGCGAATCCGTATGGAGATCCCTAAGGTCGATGCCGTGTTTGTTGGTACAGGGGACTTATTTGCTGCTATGCTGCTGGCCTGGACCCACCATCACCCTAATGACCTGAAgAGGACCATCTCCTGTGCAAAAGCCATGGCTGGAGATGGGAAGAAACCTAGTGCAGCCCAGCTGGAACTCCGGATGGTCCAAAGCAAAAAGGACATAGAAAACCCAGAAATCGTTATACAAGCCACAGTGTTATAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91945 lncRNA downstream 5161 36055996 ~ 36057458 (-) True G73606
TU91890 lncRNA downstream 219628 35434969 ~ 35842991 (-) True G73568
TU91882 lncRNA downstream 597954 35391184 ~ 35464665 (-) True G73562
TU91864 lncRNA downstream 639484 35340673 ~ 35423135 (-) True G73548
TU91844 lncRNA downstream 702242 35275736 ~ 35360377 (-) True G73533
TU91948 lncRNA upstream 120740 36194048 ~ 36194250 (-) True G73609
TU92025 lncRNA upstream 400935 36474243 ~ 36475948 (-) True G73667
TU92063 lncRNA upstream 572751 36646059 ~ 36652043 (-) True G73704
TU92083 lncRNA upstream 616049 36689357 ~ 36730561 (-) True G73722
TU92141 lncRNA upstream 942642 37015950 ~ 37016173 (-) True G73776
AMCG00014840 mRNA downstream 76051 35978206 ~ 35986568 (-) True AMCG00014840
AMCG00014842 mRNA downstream 248181 35792348 ~ 35814438 (-) True AMCG00014842
AMCG00014841 mRNA downstream 295229 35742534 ~ 35767390 (-) True AMCG00014841
AMCG00014838 mRNA downstream 374522 35634987 ~ 35688097 (-) True AMCG00014838
AMCG00014839 mRNA downstream 470163 35581715 ~ 35592456 (-) False AMCG00014839
AMCG00014844 mRNA upstream 100537 36173845 ~ 36332481 (-) True AMCG00014844
AMCG00014845 mRNA upstream 300229 36373537 ~ 36390780 (-) False AMCG00014845
AMCG00014847 mRNA upstream 391146 36464454 ~ 36526810 (-) True AMCG00014847
AMCG00014846 mRNA upstream 466510 36539818 ~ 36570308 (-) True AMCG00014846
AMCG00014849 mRNA upstream 729924 36803232 ~ 36804839 (-) True AMCG00014849
TU91914 other downstream 453942 35580626 ~ 35608677 (-) True AMCG00014839
TU91607 other downstream 1292640 34769583 ~ 34769979 (-) True G73328
TU91480 other downstream 3256324 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 3443470 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 3447813 32597462 ~ 32614806 (-) True G73127
TU91940 other upstream 28050 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 180466 36253774 ~ 36254187 (-) True G73612
TU92007 other upstream 299843 36373151 ~ 36393493 (-) True AMCG00014845
TU92209 other upstream 1251712 37325020 ~ 37325307 (-) True G73833
TU92296 other upstream 1706025 37779333 ~ 37783575 (-) True G73916

Expression Profile