RNA id: AMCG00014848



Basic Information


Item Value
RNA id AMCG00014848
length 389
RNA type mRNA
GC content 0.50
exon number 3
gene id AMCG00014848
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36295716 ~ 36297723 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GTCTTGTGGAACCAATTTGTCTACCTAACTATGGTGAAGAGTTTGAAGATGGGAAAATGTGCTGGATTTCAGGCTGGGGTGCAACAGATGATGGTGGAGAAGCAACTGTGTCTATGAATTATGCCCGAGTTCCTCTGATCTCTAACAAAGTGTGCAGCCAGCCTACTGTGTACCAGGGCTTTATCACTCCACGGATGATCTGTGCTGGTTATTTGGAAGGGGGTACTGATTCTTGCCAGGGAGACAGCGGAGGTCCTCTGGCATGCAAAGATTCCTCTTTGTGGAAACTGGTGGGTGCCACAAGCTGGGGACTGGGCTGTGCAGAGCGCAACAAACCAGGAGTGTACACCAGGATCACACAATGTCTGGACTGGATCCATGAGCAGATG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91955 lncRNA upstream 37248 36258228 ~ 36258468 (+) True G73616
TU91947 lncRNA upstream 101401 36194050 ~ 36194315 (+) True G73608
TU91836 lncRNA upstream 197768 36097280 ~ 36097948 (+) True G73525
TU91776 lncRNA upstream 552869 35740535 ~ 35742847 (+) True G73471
TU91767 lncRNA upstream 611558 35674973 ~ 35684158 (+) True G73463
TU91960 lncRNA downstream 6861 36304584 ~ 36349056 (+) False G73619
TU91961 lncRNA downstream 6861 36304584 ~ 36349056 (+) True G73619
TU91986 lncRNA downstream 178885 36476608 ~ 36477950 (+) True G73638
TU91990 lncRNA downstream 192460 36490183 ~ 36500130 (+) True G73641
TU92048 lncRNA downstream 357232 36654955 ~ 36689065 (+) True G73689
AMCG00014837 mRNA upstream 743909 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014834 mRNA upstream 821347 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 883644 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 912813 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014833 mRNA upstream 974734 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014850 mRNA downstream 319942 36617665 ~ 36733253 (+) True AMCG00014850
AMCG00014852 mRNA downstream 615677 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 702907 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 1398937 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014864 mRNA downstream 1456072 37753795 ~ 37754523 (+) True AMCG00014864
TU91690 other upstream 901067 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 1335269 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 1515126 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 2056316 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 2929616 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 1220385 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 2134651 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 2512970 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 3038545 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 3309164 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile