RNA id: AMCG00014849


Basic Information

Item Value
RNA id AMCG00014849
length 1608
RNA type mRNA
GC content 0.56
exon number 1
gene id AMCG00014849
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36803232 ~ 36804839 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCTGTTCTTCTCTTGTACAGAAGAACCTTCAAGATGGATCGTCAATGAGAAGGGTGCTATCCTCCATGAGAGTGATGGAAGCTTCCTCAGGATCCCCAATCTCTGCCTCCTGGCTGTTACCCCTCGCTTTGAATTCAGGTGCCAATGTCACCTCCACTCTCTTCCACCCAGTCACGGGTGACCCCTTTCTCCACCTCCTGGACCTAAATGGCTCTCTCCAAAATGAGAGCTTCCTGAACAGCACGAAAACAGTCCACATGGCCAGCCAGGGTCCAAGTGTGGCAGGGGTCTTGATTCCTCTCATCTACATTGTGGTGTGCATCATTGGCCTGGGGGGCAACACTCTGGTCATTCACATTGTGCTGCACTACTCCAAGACCGAGTCAGTGACGAACATCTACATCCTGAACCTGGCCATTGCCGATGAGCTCTTCATGCTTGGGCTGCCCTTCCTTGCAGTGCAGAATGCCCTCTCCTCCTGGCCCTTTGGCTCCTTCATGTGCCGTCTGGTAATGACGGTGGATGGCATCAACCAGTTCACCAGCATCTTCTGCCTGACAGTTATGAGCATCGACCGCTACCTGGCCGTGGTGCACCCTATCCGCTCCTGCAAGTGGCGGAAGCCCCAAGTGGCCAAGGCAGTCAACGGCACAGTCTGGGCTGTGTCCTTCATTGTCGTCCTCCCAGTGGTAATCTTTTCTGATGTCCCAAAGGGAGGCGGGATCTGCAACATAGACTGGCCCCAGCCAGCAGACATCTGGAGGGCTGCCTTCATTATCTACACCTCCACTCTGGGATTCTTCGGGCCCCTGCTGATCATCTGCCTGTGCTACCTCCTGATTGTAGTGAAGGTTCGCAGTGCGGGGAAGAAAGTCCAAGCCACCTCCACCCGTCGAAAGAAGTCCGAGCGCAAGGTGACCCGTATGGTTGTTATTGTGGTTGCCGTCTTCGTCTTCTGCTGGCTCCCCTTCTATGCCCTGAATATCATCAACCTGGTGGTGTCCCTCCCAAAGGAGCCCATGGGCGTTTACTTCTTTGTGGTGGTCCTGTCTTATGCCAACAGCTGCGCCAATCCCATCGTCTATGGCTTCCTCTCGGACAATTTCAAGCGGGGCTTCCGCAAGGCTCTCTGTCGCTCCACCCGCAAAGTGGAGAGCCAGGAGCAGCTGGCCGTTGCCGAGCGCCACCGTCggaggcaggaggaggaggatgaggtgGAGGAGCACAAGCAGAGGGTGCCGGAGCCCCGGGATAGCCTGCACAGGAGATGCAGGGATGAGGACGATGACGAGGACGATGAGGACAGGGAGGTCACCGAGATGACTGAGATCTGCCACATTGCTCAGAATGGCGATGGCAGCGGGCGACCAGAGACATCCCGGGCCCTCTTTTTGCAGAAAGGGGTTGGGGAAGGCCTCCTGGGCACGTCCCCTGTCTCTCCAGGGCACCAGGATCCCAAACGGGCTGTGGAGCCCAATGGGAAGGGCCCTATATTTGCAGCCCCTGCCCCTGCCTTAGTCAATGGAGCCAAGAATGGCAGTGTTAAGCCAATGCCTGAGGAGCCTTCAGAGAAGAACGCTTTGCTGGAGATCAGCTATTTATAA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004994 somatostatin receptor activity molecular_function

KEGG:

id description
K04219 SSTR3; somatostatin receptor 3

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92083 lncRNA downstream 72671 36689357 ~ 36730561 (-) True G73722
TU92063 lncRNA downstream 151189 36646059 ~ 36652043 (-) True G73704
TU92025 lncRNA downstream 327284 36474243 ~ 36475948 (-) True G73667
TU91948 lncRNA downstream 608982 36194048 ~ 36194250 (-) True G73609
TU91945 lncRNA downstream 745774 36055996 ~ 36057458 (-) True G73606
TU92141 lncRNA upstream 211111 37015950 ~ 37016173 (-) True G73776
TU92178 lncRNA upstream 368091 37172930 ~ 37173171 (-) True G73803
TU92228 lncRNA upstream 713204 37518043 ~ 37518331 (-) True G73851
TU92230 lncRNA upstream 726631 37531470 ~ 37531976 (-) True G73853
TU92234 lncRNA upstream 768899 37573738 ~ 37574140 (-) True G73857
AMCG00014846 mRNA downstream 232924 36539818 ~ 36570308 (-) True AMCG00014846
AMCG00014847 mRNA downstream 276422 36464454 ~ 36526810 (-) True AMCG00014847
AMCG00014845 mRNA downstream 412452 36373537 ~ 36390780 (-) False AMCG00014845
AMCG00014844 mRNA downstream 470751 36173845 ~ 36332481 (-) True AMCG00014844
AMCG00014843 mRNA downstream 729924 36062619 ~ 36073308 (-) True AMCG00014843
AMCG00014851 mRNA upstream 126168 36931007 ~ 36944739 (-) True AMCG00014851
AMCG00014855 mRNA upstream 239371 37044210 ~ 37047479 (-) True AMCG00014855
AMCG00014856 mRNA upstream 264032 37068871 ~ 37073768 (-) True AMCG00014856
AMCG00014854 mRNA upstream 275318 37080157 ~ 37115666 (-) True AMCG00014854
AMCG00014858 mRNA upstream 497385 37302224 ~ 37309817 (-) True AMCG00014858
TU92007 other downstream 409739 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 549045 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 620881 36101358 ~ 36182351 (-) True G73604
TU91914 other downstream 1194555 35580626 ~ 35608677 (-) True AMCG00014839
TU91607 other downstream 2033253 34769583 ~ 34769979 (-) True G73328
TU92209 other upstream 520181 37325020 ~ 37325307 (-) True G73833
TU92296 other upstream 974494 37779333 ~ 37783575 (-) True G73916
TU92499 other upstream 1538483 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 1607321 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 1627424 38432263 ~ 38432875 (-) True G74115

Expression Profile