RNA id: AMCG00014850



Basic Information


Item Value
RNA id AMCG00014850
length 867
RNA type mRNA
GC content 0.50
exon number 9
gene id AMCG00014850
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36617665 ~ 36733253 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TACAGGGCCTTCACTTTTGTTCTGACTTTCCTGCTCTACACCAGCTACCATCTCTCCAGAAAGCCTATCAGTATTGTCAAGAGTGAATTGCACAAGAATTGCTCCTTCTCCAACCACTTGGATGCTTTCAGCTCCCAGGATACTCTCCTTGTCAGCAGTGTGTCATGCAGCTGGAAGCCCTTTGGTATTGGGATAATCGGAGAGCGGTTACCTATCAGGTATTTTCTCACATTTGGGATGCAGGCCAGTGGTTTCTTCACTTGTCTCTTTGGCCTTGGGTATTTTTACAATATCCACAATTTCtggttttacatttgtgttcagGTGGCTAATGGATTAGTCCAAACCACAGGCTGGCCCAGTGTAGTGACCTGCATTGGGAACTGGTTTGGTAAAGGAAGattcagaccaaagcagcagcacatCGAGTCTGTATCGCTGCTGTGCGGACAATACGGACAGCGGAGGCTCCGACACGCCCTGCTGTTCTTAGCACATCAAATTGATCAACGTGCTGCCCTAGGCCCCCTGCTGGCTGGCCTGCTGTCTCCCACTGGCTGGAACAACGTCTTCTACATGCTTATGGCTGCCGACACCTGTGCTCTGCTGGATCTTATTCGACAATTAAAGGAGGAGGTTCAGCGGCCTGCCGATGCCCCTATAATTCAGCATTACAGTGCACCTCAGGGGGAAGAAGGGGGGGACGTGGGTTTAGAGGATACTCACGGGGTAGGGGACGTGGTTTTCAGTCTGAATCTCAACAAAACCAAGAAGCACCTAGAGTTTGTTTCAATTGTGGTGGCAAAGGTTCGTTTTCAGCAGGCCGACAGTCGTCTGTCTTCCAAGGGATCCCAACTCCACTGGCCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91990 lncRNA upstream 117535 36490183 ~ 36500130 (+) True G73641
TU91986 lncRNA upstream 139715 36476608 ~ 36477950 (+) True G73638
TU91960 lncRNA upstream 268609 36304584 ~ 36349056 (+) False G73619
TU91961 lncRNA upstream 268609 36304584 ~ 36349056 (+) True G73619
TU91955 lncRNA upstream 359197 36258228 ~ 36258468 (+) True G73616
TU92102 lncRNA downstream 39232 36772485 ~ 36772741 (+) True G73739
TU92111 lncRNA downstream 105576 36838829 ~ 36941821 (+) True G73748
TU92162 lncRNA downstream 427735 37160988 ~ 37163326 (+) True G73791
TU92177 lncRNA downstream 439678 37172931 ~ 37173176 (+) True G73802
TU92181 lncRNA downstream 509982 37243235 ~ 37243446 (+) True G73806
AMCG00014848 mRNA upstream 319942 36295716 ~ 36297723 (+) True AMCG00014848
AMCG00014837 mRNA upstream 1065858 35551157 ~ 35551807 (+) True AMCG00014837
AMCG00014834 mRNA upstream 1143296 35464001 ~ 35474369 (+) True AMCG00014834
AMCG00014836 mRNA upstream 1205593 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014835 mRNA upstream 1234762 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014852 mRNA downstream 180147 36913400 ~ 36914503 (+) True AMCG00014852
AMCG00014853 mRNA downstream 267377 37000630 ~ 37030062 (+) True AMCG00014853
AMCG00014862 mRNA downstream 963407 37696660 ~ 37706352 (+) True AMCG00014862
AMCG00014864 mRNA downstream 1020542 37753795 ~ 37754523 (+) True AMCG00014864
AMCG00014863 mRNA downstream 1021606 37754859 ~ 37755848 (+) True AMCG00014863
TU91690 other upstream 1223016 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 1657218 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 1837075 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 2378265 34238934 ~ 34239400 (+) True G73292
TU91511 other upstream 3251565 33364755 ~ 33366100 (+) True G73244
TU92227 other downstream 784855 37518108 ~ 37518406 (+) True G73850
TU92541 other downstream 1699121 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 2077440 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 2603015 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 2873634 39606887 ~ 39621186 (+) True AMCG00014913

Expression Profile