RNA id: AMCG00014865


Basic Information

Item Value
RNA id AMCG00014865
length 2770
RNA type mRNA
GC content 0.57
exon number 15
gene id AMCG00014865
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37802094 ~ 37864483 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cctcctcccactCTGCTTCTATAGAGGAAGCGAGTGTTTTAGTTTGAATGCATTCTTTTCACTCAAGGACACGCACCGAGAGAGCGACACATATGtacgcagagacacacacacacagagaacaaCACACACTAAGAGCAATACAGATCgacaaaagacagacagaaacacacagaagtGACACATGCTGGCAAGATAGAAAGAGACACACTAACTCTCGCAAACTTTACTGGCCATACATCAACGATAACAGCACCGttactccacacacacacagattgtaTGTATGATCGAGAGGATGATGGCGTGACTAAGACAAATGcctcTCCACCGAAGCCCAGGGACACGCAGAAAGACACCTCCTACCCCTGCCATGGCTCATCTCTGGATCCTTTGTACTGCCAGCCTACTAACCCTTTCCCTGCCCATCCACTGCACCCCCCCCAGAGCTGGCACACAACCCACCCAGCAGATGTCACAGGCCATGCAGTCTCTTCGGTGCTACAATGACTACATCTCCCAGATTGAGTGCAGCTGGAATGAGACCCAAGAGGCCCACAGCCTGGCCCCTCTCACACTGCACCACTGGAACCAAATAAAGAACCGACAGTGTGTGCCCAGTGACCCTCCAGTAAACAGATCCCAGTCTGTGCTGGAATTTCGCTGTCGTTTTAACAACTCAGATTTGGCGATTGGGATCCTGGACTCCTTCCTGCTGCACCCCCTCCCGTTGCACCCACAATGGCCCAGCCTCCAAGCCCTCCTCTTGGGAGACAACGTAAGGCCACGACCGCCCAGGAACCTTGTGTACCAGATGACACAGGAGGGGGGCACTGTGCTGACCTGGGACAGTGTCTACCCCCTTGACCACTCCCTTCACAGCACACTGAACTACCAGCTGCAGTACAGGAgagccccccaggactggacggaggcTCTGGTCTCTAAATCACAGTTGGCACTGGGGGACCTGGTGCCAGGTGTCAATTACCAGGCCCGAGTCCGAGCACGGGTCAGAGAGGGCAGCTGGAGCGAGTGGAGCCCCCTGCTGGAGTGGAGGACTAAGGACATCAGTGACTGGGGTCCCTATAACCTGCACTGTGATTTTGATGGACTGGACGAAGTCACCTGTACCTGGGAGGTCAAGAGAGAGGTCACCAGCTCCATACTCTTTAACCTCACCTACCACACCAGCCCCACAGCACAGGAGCAGTCCTGCTGTCCAGAGGCAGTGAACTCCAACTCCCATGATCCCTTACTACTGTTCCGCTGTCAGTTCCCAGCAACCACCTCCTCTGAGCTGCAGGTGCACCTCAGACCCGCCGAACTACAGAAGGAATTTCTGCCAAACCAACACAtcaAGCCACCAGCTCCCCAGGCTGTGTCCATTGAGGACAAGGGTGATGGGCTGCTGCTGAGCTGGAAGCTGCCTGTCCTGAATTACGAAATGGTGCTGGACACCCAGGTGCGCTACTGGAGGGATGAGCAGCAAGAGGAGAAAGTGGAGACCATTGTAGTGAATCAAAGCACGTCCTCCATCAATCTGCAACTCAATCAGCTGTCCCCGGGGGCCAGCTACAGTGTGCAGGCACGAGTGTGCGTGTCCCACAGCGGGGATGAGCTGGGGTACAGCGGCACCTGGTCTGACTGGAGCCCGACAGGGCATTGGAGCACTCCACCAGACTTCTCTCTTCCGGCCTCCTGCTTCTACTTCCTGCTGTCCCTCAGTGTGGCTACGGTGGCTATGTTCCTGTTCTGTCTGTACAGACGGGCACACACGTGCTCAGACTGCTCCTGGTCTCCAGTGGAGGAAGACAGCGGTTCATACCAACGCATTACCTGGGCAGGGGTGTCCGGAACACCACTGCTTCTCCAGTGTGGTGATGGGGGGCAGGGCCAGGGTGGGGAGAGGCGGGTCTGGAACCAGGGatgcccctccccctccctcaacTTTACCGGGCCCTATATCCTGTGCCCACAATCCTCTGCTTCCAACCCTGACCTGGGGGCACCCTGTAGCTCCTACAACCCCTTCAGTTCCATCCCCAGTGACCAGCTTGGCCAGTCCAGCAATGGCTACATCACAGACCCTCTAGAGATGATGACCCGGTCTGAAAAAATCCCACTCGCTCTGTATGGGACATCTAAAATGGGGGTGTGGCCTGGGGAGGGGTCTGAAGGAAAGTTGGGGGAGGGATGTGGGGTGTTGGGTTTGGGGGTTCTGGAGGGGTATGTGGAGAGTTCCCCTAGCCTTACCACAGGTCCCCCACCTCTGCAGTTTGTCACGGGACATCCCATAAGTGACCCCAGCTCAGATACCCACTcaccctcctccctctcctgtGCCTCGccctcctctttctcttctttcccAGGCAAGCAGATGGCAGACAGTCTCCCAGACCCTCCCCCTGCCCACACTCTGTGCCCACAGTccatccccctcctcccctccccctcctcctcctcccacccACCCCTCCTCAACCAGGTGGGCGACTACTGCTTCCTCCCTGACCCCAGTGGCCAGGACTGGGACTCGGCCCACCCCCCTGGTGACCTCCTGCCCCCCACAGGTTCGAAGGATAAGCCGGGGTTGGGCAAGGCAATCGATGATGACCCGTACATCCGCCCAAACCAGCCTGTTCGGCTCAGGACCCCAGGGAACCACAACAAGGATGATCTTCTTGGCTGGGAGGTGCTGGGGCTCCTTGCTTTCGAGAGTGGAGGCAGCAAGCTGGGCCTGGTTTTGGCCAACCTTAAATCATAA

Function

GO: NA

KEGG:

id description
K04738 CSF2RB, IL3RB, CD131; cytokine receptor common subunit beta

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92297 lncRNA downstream 18519 37779333 ~ 37783575 (-) False G73916
TU92291 lncRNA downstream 98046 37703846 ~ 37704048 (-) True G73911
TU92288 lncRNA downstream 118552 37683239 ~ 37683542 (-) True G73908
TU92243 lncRNA downstream 219932 37581766 ~ 37582162 (-) True G73866
TU92234 lncRNA downstream 227954 37573738 ~ 37574140 (-) True G73857
TU92368 lncRNA upstream 198864 38063347 ~ 38071617 (-) True G73980
TU92433 lncRNA upstream 313491 38177974 ~ 38180598 (-) True G74030
TU92434 lncRNA upstream 315564 38180047 ~ 38180598 (-) False G74030
TU92461 lncRNA upstream 416954 38281437 ~ 38283517 (-) True G74052
TU92512 lncRNA upstream 444602 38309085 ~ 38340216 (-) True G74093
AMCG00014860 mRNA downstream 185732 37602472 ~ 37616362 (-) True AMCG00014860
AMCG00014861 mRNA downstream 243885 37554889 ~ 37558209 (-) True AMCG00014861
AMCG00014859 mRNA downstream 380927 37417533 ~ 37421167 (-) True AMCG00014859
AMCG00014857 mRNA downstream 442385 37323742 ~ 37359709 (-) True AMCG00014857
AMCG00014858 mRNA downstream 492277 37302224 ~ 37309817 (-) True AMCG00014858
AMCG00014866 mRNA upstream 6923 37871406 ~ 37887963 (-) True AMCG00014866
AMCG00014871 mRNA upstream 80664 37945147 ~ 37954312 (-) True AMCG00014871
AMCG00014875 mRNA upstream 172880 38037363 ~ 38040051 (-) True AMCG00014875
AMCG00014874 mRNA upstream 183003 38047486 ~ 38052112 (-) True AMCG00014874
AMCG00014878 mRNA upstream 261560 38126043 ~ 38128745 (-) True AMCG00014878
TU92296 other downstream 18519 37779333 ~ 37783575 (-) True G73916
TU92209 other downstream 476787 37325020 ~ 37325307 (-) True G73833
TU92007 other downstream 1408601 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 1547907 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 1619743 36101358 ~ 36182351 (-) True G73604
TU92499 other upstream 478839 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 547677 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 567780 38432263 ~ 38432875 (-) True G74115
TU92559 other upstream 625840 38490323 ~ 38490940 (-) False AMCG00014891
TU92596 other upstream 732885 38597368 ~ 38644538 (-) False G74160

Expression Profile