RNA id: AMCG00014866


Basic Information

Item Value
RNA id AMCG00014866
length 1514
RNA type mRNA
GC content 0.53
exon number 8
gene id AMCG00014866
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37871406 ~ 37887963 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GTTGGTTCAACAGGCCAACTTGCAACACACTCCAATGCGCAATTTTAACACTTATCGCCCACGGTCGGCGCCGCGTGTGTTTCCGTGGATCTGTGTTACCCAACTAACTTCAGCGTTTTGCTTCCAAAAATGAGAGGCGTTGTGTTTGCGACCTTCTCGCTTCCTGTATCACGGCGACGCACAGTACATAGCTCAAATCTGACTCAAAGCCAGCCTTCtccagcccagtccagcccTGCCCAGCCAGTAATGACCAGCTAACTAAGCGACTGACCGACCGAACAACCGTTGGACGGACAGAGGAAGTAACCGCGCTCTACCGTCGCTGCCCCGGTGCCTCTTTCTCCACCTTACCGGCCGCCCCGTGGTCTGTCCCGGCGTCACCATGTCTTTACCTCGGCAGCTGAGAGACGAGAGtgaTTTTGACCAGCTCCCAGAGGAAATCCCCATCTCAGCAACAATTGCAGACATAGAGGAGAAGAGGGGCTTCACAAGCTACTATGGGCTGCTGAGCCTGCCTACTTGGGCCCTGCTGGATGACCTCATCAGGATGTTCTTCTACCAGACTGAATCTGACAGCCAGCAGGTCCCCCGCAACCTGCGTCGCCTGCGGCCCCCTACCCGCAGAGTGAAAACCATAAAGCCCAAGATGGATCTTTTCTCCAGCCCAAGAGCTGAGGCGCTGTTCGGGTTTAACGGCAGCGGGCGACTGGAGCTGAGCTTCAGTGCGGGAGAGGTGATCTTCCTGCTGAGGCGAGTGAACAGAGACTGGCTGGAGGGCACAGTGCGGGGGGTGACTGGCATTTTCCCCCAGTCCTTTGTCAAGGTAATCAAGCCCCTCCCTGACGACAGTGACGAGGAGGAAGCGGGGGGTGGTCGGGGGGGTTACAGCTGCCTGCGCTGCTACCTGCAAGAAAACAACGAAACTCAGCTCAGGGAAGTCTTTAACCGTGATGACATCTCTCTGAACTACCGTGACCCAGAAGGAGATCTGGTCCGGATCCTGGATGACCTGGATGTGGCTCTCATGGTAGAGGAGAGCAAAATTCAAGACGGGGTCAAGCGGCCGGTCAACCAGTACCCCTGGGAGCTGCATGTGACCccgacctctgacctctcagTGTACAACAATGCGCCCTGAGACAccaatactgtactgtacttgtcCTGCCCTGTCCTCTCCTGTCCTGTGATGtcctgtgctgtattgtactgtactgagcttttgtgtctttatcaGTACCCTATAGGCTACAGTAACAACAGTTGTCAAATACATGCACAGCTGGAGTCTTGAAGTCGCACTAAAGTGTTAGTTTGtctgctgtgtctctgtgatGTGATATTGGTGGTGTTGTTGTCTGTACAGGGGCTCCGACGTTTGCTCCTGCAGGAGCTGGCctgtattgtacatttcagGGAATGTCCATTACCTTCTGAGCATTATCTCCAGCCAGTCATTGtgcagcaataaataaatgtctaaataaataaataataataataaaaaaaaa

Function

GO: NA

KEGG:

id description
K08012 NCF4, P40PHOX; neutrophil cytosolic factor 4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92314 lncRNA downstream 27063 37843170 ~ 37844343 (-) False AMCG00014865
TU92299 lncRNA downstream 44704 37826479 ~ 37826702 (-) True G73918
TU92297 lncRNA downstream 87831 37779333 ~ 37783575 (-) False G73916
TU92291 lncRNA downstream 167358 37703846 ~ 37704048 (-) True G73911
TU92288 lncRNA downstream 187864 37683239 ~ 37683542 (-) True G73908
TU92368 lncRNA upstream 175384 38063347 ~ 38071617 (-) True G73980
TU92433 lncRNA upstream 290011 38177974 ~ 38180598 (-) True G74030
TU92434 lncRNA upstream 292084 38180047 ~ 38180598 (-) False G74030
TU92461 lncRNA upstream 393474 38281437 ~ 38283517 (-) True G74052
TU92512 lncRNA upstream 421122 38309085 ~ 38340216 (-) True G74093
AMCG00014865 mRNA downstream 6923 37802094 ~ 37864483 (-) True AMCG00014865
AMCG00014860 mRNA downstream 255044 37602472 ~ 37616362 (-) True AMCG00014860
AMCG00014861 mRNA downstream 313197 37554889 ~ 37558209 (-) True AMCG00014861
AMCG00014859 mRNA downstream 450239 37417533 ~ 37421167 (-) True AMCG00014859
AMCG00014857 mRNA downstream 511697 37323742 ~ 37359709 (-) True AMCG00014857
AMCG00014871 mRNA upstream 57184 37945147 ~ 37954312 (-) True AMCG00014871
AMCG00014875 mRNA upstream 149400 38037363 ~ 38040051 (-) True AMCG00014875
AMCG00014874 mRNA upstream 159523 38047486 ~ 38052112 (-) True AMCG00014874
AMCG00014878 mRNA upstream 238080 38126043 ~ 38128745 (-) True AMCG00014878
AMCG00014879 mRNA upstream 253944 38141907 ~ 38160087 (-) True AMCG00014879
TU92296 other downstream 87831 37779333 ~ 37783575 (-) True G73916
TU92209 other downstream 546099 37325020 ~ 37325307 (-) True G73833
TU92007 other downstream 1477913 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 1617219 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 1689055 36101358 ~ 36182351 (-) True G73604
TU92499 other upstream 455359 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 524197 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 544300 38432263 ~ 38432875 (-) True G74115
TU92559 other upstream 602360 38490323 ~ 38490940 (-) False AMCG00014891
TU92596 other upstream 709405 38597368 ~ 38644538 (-) False G74160

Expression Profile