RNA id: AMCG00014873



Basic Information


Item Value
RNA id AMCG00014873
length 945
RNA type mRNA
GC content 0.61
exon number 7
gene id AMCG00014873
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38023589 ~ 38027260 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CCCCAGGCCCTCACGGCCATGCCCAACATGGCCACTGACTGGGGCCACCACTCCTCACCCAACATGGCCACTGGCGAGGGTCATCCCACCACACTCAAGAAGGCCACCGGCCCAGCCCAGGCCAGGCTGCAGGCCCTTTTCCAGCACCCTCTGTACAACCTGCCTCAGCCCCAGCTGATGGAGGATGATTGGCTGCTGAGAGTGAAggaGAGCAACGATGAGGGCTACGGAGGCCCTCAGTGGACAGACAGCGCTGACACTCACCCCCCCTGGTTACGCTTCCACCTAGGCATCACGCGCTGGGCGCTGTATCACCGTGACGACCCTGCCCTGCcccagctcctgcagcagctctcCACTCACCGCATCGTCAGTGCCgTGCAGAAGCCCGGAGGCACGCAGCTCAAGCTAGTCATGTCATTCCCCAACTACGGACAGGCGCTGTTCAAACCCATGAAACAGGAACGGGATGAGGAGACCAATCTCAATCTCTTCTACTTCTCTGACTTCGAGAGACACAATGCAGAGATAGCAGCCTTTCACCTGGACAGAGTGCTGGGCTTTAACAGGGTACCTCCTGCGGTGGGGCGACTGGTCAATGTCACCTCAGAGATACAGCAGCTGACCACTGACCGCCGTCTGGCTCGCACCTTCTACACCTCCCCGGGGCTCCATGGCCGCCTTCCTGCCCGACCTCAGCCTGGCCCCTCGCAGGAGCTGGAGGAGTCCCTGGCGACGCTCCTACAGCCGCCACCGCCgggcagagtgagagaggggggtagacagaggagggagggagagggggagggaggGTGGGAGAAGAACCCTGACTACTGCACGACGGTTAAATCCACCCCCCCCTACAACACAGGCACCCGATTAGCAGACCTCATAGACATGGCCATACTGGACTTTCTCATGGGTAGGTTCTGTTCTTCTGGGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92327 lncRNA upstream 90794 37932522 ~ 37932795 (+) True G73944
TU92322 lncRNA upstream 138901 37876261 ~ 37884688 (+) True G73939
TU92298 lncRNA upstream 202227 37821086 ~ 37821362 (+) True G73917
TU92294 lncRNA upstream 277402 37745983 ~ 37746187 (+) True G73914
TU92269 lncRNA upstream 314788 37708286 ~ 37708801 (+) True G73889
TU92477 lncRNA downstream 284216 38311476 ~ 38313617 (+) True G74067
TU92590 lncRNA downstream 621662 38648922 ~ 38649249 (+) True G74157
TU92592 lncRNA downstream 624137 38651397 ~ 38655398 (+) True G74159
TU92634 lncRNA downstream 684448 38711708 ~ 38712076 (+) True G74192
TU92637 lncRNA downstream 686405 38713665 ~ 38714115 (+) True G74195
AMCG00014868 mRNA upstream 56683 37965377 ~ 37966906 (+) True AMCG00014868
AMCG00014869 mRNA upstream 67073 37954370 ~ 37956516 (+) True AMCG00014869
AMCG00014867 mRNA upstream 78837 37935591 ~ 37944752 (+) True AMCG00014867
AMCG00014870 mRNA upstream 118613 37901797 ~ 37904976 (+) True AMCG00014870
AMCG00014863 mRNA upstream 267741 37754859 ~ 37755848 (+) True AMCG00014863
AMCG00014872 mRNA downstream 46424 38073684 ~ 38088035 (+) True AMCG00014872
AMCG00014876 mRNA downstream 142609 38169869 ~ 38176166 (+) True AMCG00014876
AMCG00014877 mRNA downstream 150614 38177874 ~ 38180456 (+) True AMCG00014877
AMCG00014882 mRNA downstream 193261 38220521 ~ 38227829 (+) True AMCG00014882
AMCG00014881 mRNA downstream 207437 38234697 ~ 38244140 (+) True AMCG00014881
TU92227 other upstream 505183 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 2628940 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 3063142 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 3242999 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 3784189 34238934 ~ 34239400 (+) True G73292
TU92541 other downstream 405114 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 783433 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 1309008 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 1579627 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 1837822 39865082 ~ 39872003 (+) False AMCG00014923

Expression Profile