RNA id: AMCG00014882


Basic Information

Item Value
RNA id AMCG00014882
length 1872
RNA type mRNA
GC content 0.55
exon number 9
gene id AMCG00014882
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38220521 ~ 38227829 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gagagagagagagagagagcgcagagTTAAGTTCAGTACAGTAGAAGTACATATTGTTGTTTGAACAGTTTTAACAGAGATTTAAgtcacagagggagagagagttggAGGGAaaccagagagagaaaaagcgTGCGACAGAGAGGGAgctgttttaatctgttttagtAAGGATTTGAATGTAATCTGAGATctaaaaaacagagagagagagggagtgaatatttgttttaatttagtttaagtACATCTCTGTGTTGAAATAGTTTTAACAGTGATCTGAGTATATATctgggagagagaagagattgTACAGTGAGTGAGTTTGAAGatcagtctctgtgtgtgggaAGGGATTTTTTCTGATCTGGGCTGTTTGCAAGAAACAGAAACCTTAAGGTTAAGATGGATTCAGCCTGAAACTGAAGTTGGACTGAGCAGCACCAGCCTCTCCACTCCAGATAAGATAAAATCATCCTTTCTTGTCTAAAGTACTCCATTCAGTTGGCTCCACTGGGCATTGGTGGCACAGATTCTGTGTGGAGGGAAAGTGGGAAAGGGAGAGCGAAAGAGATTCTGTCTGTGCTTCTCGCTCTGCAGGATGAGTGTGACAGTGCAGTGATGaagtctgtgtgtctgacagcTCTTCTGGTCACCCTGGCAACAGCATCAGTTCACACCAATCCCAGCCCAGACCCCCCCAGCCTGATGTGTGTGACTGATTACCTCACCGCCATCACCTGCCACTGGCACAGCACTGGCCACCCCAGCTCCGACTGCACTCTGCACACAGACAACTCCAGCCAGCCAGTTGCCCAGATTTCTGGGTTCAGACCTCCTTTCAATGtgAAAATGCACCCCCCCACAGCTCCCACGGTGAACAGGTCCGTGCTGTCCTGGCATGAGGGGCCCCTGGTGTCTGAATTGATCCAGCCACGCAGCTTTCAGTTCATGTTCAAATGCAGGAACCAGAGCTGGGAGGAAGCTTTTTCCAGCGAATTGACAGAAGATAAAAGGCTCCAGCTGGACGAGAGGGGTCTGCAAATGGGGGCCCAGTACCAGGCCAGGGTCCGAGTCCAGCCCACTCTAAACAAGGGATTTGAGGGCCAGTGGAGTGACTGGAGCCCGATCACTGAGTGGACCTCTGACGTTGTCATGGAAGGCCCCGATATGCAGGACTCTCTGATACCAATGCTGGTGCTGGCGATCAGCGCAACGGCTGGGCTGTGCTGCACCGTGCTCATCTGCGGTTACAGGAAACCCAGATGGGCCTACAAGGGGACCTGTCTCCACGTCCCAGACCCCTCCAAATACTTCGACCCCTTGGTGTCTGTGCATGAGGGAAACTTCCAGCCtggggtggtggaggaggcggagggggagaaggaaggagaggaggaggaggaagaggaggagagtaggcagagaggagaggatgGGGAGGATGCAGAGGTGTGCACCCCGATTTGCCCCTGCTCTTCCTATGAGAGACTTGACCCTCAGGGCAAGCGGCTGGAGGAGGCAGGAGGTGGGGTGTCTGCACAGGGCTGGGGTCCAGCCTCGCCCCCTGCCCCCTTTCCCCCCGGCCTCTTCCGCCCCCCACtcatcctcctccctcccctgaCCCTGGGACAGGACAGCCTGCCCCAGCAACAGCCCCAGCTGCCGCACTCTGCCATACTCCTGCCCCATCTGCCCTTCCCCCCTCACCTCAGAGGGCTGGGCTTGGGGGCATTTGGGCTGGGGGGACTGGGAGGGTTGGGGCAAGGGGTTGGCGATgacggtggtggtggtggaggagtGGAGCCTTCTGGAGGGGGGTACCTATCGGTCAGGGATGTGCAGGGTTGTTACAGCAACCAGTCCGTCTGA

Function

GO: NA

KEGG:

id description
K05073 IL9R, CD129; interleukin 9 receptor

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92327 lncRNA upstream 287726 37932522 ~ 37932795 (+) True G73944
TU92322 lncRNA upstream 335833 37876261 ~ 37884688 (+) True G73939
TU92298 lncRNA upstream 399159 37821086 ~ 37821362 (+) True G73917
TU92294 lncRNA upstream 474334 37745983 ~ 37746187 (+) True G73914
TU92269 lncRNA upstream 511720 37708286 ~ 37708801 (+) True G73889
TU92477 lncRNA downstream 83647 38311476 ~ 38313617 (+) True G74067
TU92590 lncRNA downstream 421093 38648922 ~ 38649249 (+) True G74157
TU92592 lncRNA downstream 423568 38651397 ~ 38655398 (+) True G74159
TU92634 lncRNA downstream 483879 38711708 ~ 38712076 (+) True G74192
TU92637 lncRNA downstream 485836 38713665 ~ 38714115 (+) True G74195
AMCG00014877 mRNA upstream 40065 38177874 ~ 38180456 (+) True AMCG00014877
AMCG00014876 mRNA upstream 44355 38169869 ~ 38176166 (+) True AMCG00014876
AMCG00014872 mRNA upstream 132486 38073684 ~ 38088035 (+) True AMCG00014872
AMCG00014873 mRNA upstream 193261 38023589 ~ 38027260 (+) True AMCG00014873
AMCG00014868 mRNA upstream 253615 37965377 ~ 37966906 (+) True AMCG00014868
AMCG00014881 mRNA downstream 6868 38234697 ~ 38244140 (+) True AMCG00014881
AMCG00014880 mRNA downstream 25133 38252962 ~ 38257417 (+) True AMCG00014880
AMCG00014884 mRNA downstream 123418 38351247 ~ 38359131 (+) True AMCG00014884
AMCG00014887 mRNA downstream 230540 38458369 ~ 38466227 (+) True AMCG00014887
AMCG00014890 mRNA downstream 326143 38553972 ~ 38572905 (+) True AMCG00014890
TU92227 other upstream 702115 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 2825872 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 3260074 34942011 ~ 34960447 (+) True G73343
TU91608 other upstream 3439931 34780122 ~ 34780590 (+) True G73329
TU91569 other upstream 3981121 34238934 ~ 34239400 (+) True G73292
TU92541 other downstream 204545 38432374 ~ 38432861 (+) True G74114
TU92678 other downstream 582864 38810693 ~ 38811128 (+) True G74227
TU92814 other downstream 1108439 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 1379058 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 1637253 39865082 ~ 39872003 (+) False AMCG00014923

Expression Profile