RNA id: AMCG00014885


Basic Information

Item Value
RNA id AMCG00014885
length 1254
RNA type mRNA
GC content 0.63
exon number 12
gene id AMCG00014885
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38303052 ~ 38317017 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCGGCGCCCGTATCTGAAGACAGGTCAGTTCCGCCCAAGATGGCCGCCCAGAGGCGAAGTTTGGTGCACAGCctAGCAAATCAGGATTTTAACAACGCAGATGGCAAGAGCACCCAGACGCACCCCAACGAGGACGGGCACCTCTGCTTCCGTCGAGTATCTAGTTTTGTGTCTCAGACCCTGACGGCCGAGCTGCTGTTGGGACAGCTGAACTCCAGTCACTCGGACAGTGATGTGAGGCGGGTCCTGTTGCAGGCGTTTGATGTGGTGGAGAAGAGTTACTTTGAGTCTATTGATGATGCCCTGGCAGAGAAGGCTGACTTGCAGGCACAGCTACCCGAGGGGGTGCCGTTTCATCAGCTCTCCCCTCAGTATCAGAAGAACTCAGAACGTCTGAgggagctggagcaggaggtGTCAGGGGGGGCTACAGCCGCTTGCTCCAGTGACCGGCAGAACCAGGTGAGCCAGATCGGCTGTCCACACACAGTGGACAACGAGGACGAACTGCTCCGCCTCGCACAGCTGGGTCTGGACGTGTCTCGGATCAAGCAAGCTGGAGTTCTGTTGGAGGGACTAATCAGAGCGCTGGAAGCTGCCCACGGTCCTGAGCAGGCCAATCAGgagATGGTGTCCATGGTTGCCGCAGAGCTGGCTCAGCAGGGCAGTGTGAGCGCGGCTGCTCAGGCTGTGGTGGACAGGGTCCGGCGACTGCACCGTGACGCCTATGCCAGCGGCCGCCCCCCCCACGGCCCCTCTCAACCCCGTGGCCaatccctgccccccccccactgtgGGAGCCACGAGGACATGACCCTGCTGCTGCGTGGCCGTTTCTACCCTGTGTCGGTGCCCTACTCCAACAACCAGTCCACCAGCAAGACCAGTGTCACCCTGTCACTGGTCATGCCCTCCCAGGGGACCCTCATGAATGGCAGCCATGCCCCCCCATCCCAGGACGAGACCACACCCACCCTGACCAATCAGAGCCCCACAGTGACCCTGCAGTCGTCCAGCACACATACCCAGTCATCCAGCTCGAGCTCGGGGGACGGGGGCAGCCTGTTCCGACAGCGGGGCAGCCAGGCAGCCCAGCCTGATGAGACCGGCCGGGTCGAGCCCTACGTGGACTTCACCGACTTCTACCGGCTCTGGAGCGCAGAGCACAGCGACGGGCCTGGGGGCGGGGCGGGGGCCGGGGGGGTGGGAATGCTGGGGAATACTTTGGTGGCAGCGGCTGGATCacactga

Function

GO: NA

KEGG:

id description
K04403 MAP3K7IP1, TAB1; TAK1-binding protein 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92461 lncRNA downstream 19535 38281437 ~ 38283517 (-) True G74052
TU92433 lncRNA downstream 122454 38177974 ~ 38180598 (-) True G74030
TU92434 lncRNA downstream 122454 38180047 ~ 38180598 (-) False G74030
TU92368 lncRNA downstream 231435 38063347 ~ 38071617 (-) True G73980
TU92314 lncRNA downstream 458709 37843170 ~ 37844343 (-) False AMCG00014865
TU92501 lncRNA upstream 26305 38343322 ~ 38350291 (-) True G74087
TU92504 lncRNA upstream 26305 38343322 ~ 38350291 (-) False G74087
TU92556 lncRNA upstream 171245 38488262 ~ 38488479 (-) True G74128
TU92567 lncRNA upstream 189175 38506192 ~ 38575968 (-) True G74137
TU92594 lncRNA upstream 323148 38640165 ~ 38644538 (-) False G74160
AMCG00014883 mRNA downstream 39568 38261530 ~ 38263484 (-) True AMCG00014883
AMCG00014879 mRNA downstream 142965 38141907 ~ 38160087 (-) True AMCG00014879
AMCG00014878 mRNA downstream 174307 38126043 ~ 38128745 (-) True AMCG00014878
AMCG00014874 mRNA downstream 250940 38047486 ~ 38052112 (-) True AMCG00014874
AMCG00014875 mRNA downstream 263001 38037363 ~ 38040051 (-) True AMCG00014875
AMCG00014886 mRNA upstream 13114 38330131 ~ 38339363 (-) True AMCG00014886
AMCG00014888 mRNA upstream 46885 38363902 ~ 38402794 (-) True AMCG00014888
AMCG00014889 mRNA upstream 98385 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014891 mRNA upstream 171602 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014894 mRNA upstream 283404 38600421 ~ 38629200 (-) True AMCG00014894
TU92296 other downstream 519477 37779333 ~ 37783575 (-) True G73916
TU92209 other downstream 977745 37325020 ~ 37325307 (-) True G73833
TU92007 other downstream 1909559 36373151 ~ 36393493 (-) True AMCG00014845
TU91951 other downstream 2048865 36253774 ~ 36254187 (-) True G73612
TU91940 other downstream 2120701 36101358 ~ 36182351 (-) True G73604
TU92499 other upstream 26305 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 95143 38412160 ~ 38413231 (-) True G74107
TU92542 other upstream 115246 38432263 ~ 38432875 (-) True G74115
TU92559 other upstream 173306 38490323 ~ 38490940 (-) False AMCG00014891
TU92596 other upstream 280351 38597368 ~ 38644538 (-) False G74160

Expression Profile