RNA id: TU92559


Basic Information

Item Value
RNA id TU92559
length 618
RNA type TUCP
GC content 0.61
exon number 1
gene id AMCG00014891
representative False

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38488619 ~ 38492954 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCCAAGTCCGTCCTGGCCTCCATGTGCCGTGACGGCGTGATTATCCCAGGCTTGGCCACCCTCTCCTCCCCCCAGGACCCATATGAGGGCTCGGGCGGGCCGGACGCGGCAGAGATGCTTGGCCCCTTCCAGCCCACCCTGCCCTCCACCGCCGACCCCGCTGTGAGCCCCAGCATCAAGTTGCACCAGGTCTCCCTCTCCTCGGCCACAATACTGGTCCAGATCCCTCGGCCCTACAGCAAGATGTATATCCTGGTACAGTACAACAGCAGTTACGTGTCCGACGTCAAGAACCTAAAGAACCGCAAAGAGATCATCACCCTGGACAAACTGGAGGcccacacaaactacaccttcTGCGTGGCCTCTATCCGCAACCAGCAGCGGCACAACCACACCTGCCTGCGATTCTCAACTCGTGCCCAGGGCCCCGATGACATGCGGCCCAGCCCCTCCACCACCACTCACTACATCATGACCGTGCTGGGCTGCCTCTTCGGGATGCTTATCGTATTGGGCCTGGTCTATTACTGCCTGCGCAAGCGGCGGCTGcaggaagagaaggaaaagtCCATCAGTGTCAAGAAGACCATCCTGGAGATGCGCTACGGGCCCGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92556 lncRNA downstream 1844 38488262 ~ 38488479 (-) True G74128
TU92501 lncRNA downstream 140032 38343322 ~ 38350291 (-) True G74087
TU92504 lncRNA downstream 140032 38343322 ~ 38350291 (-) False G74087
TU92512 lncRNA downstream 150107 38309085 ~ 38340216 (-) True G74093
TU92461 lncRNA downstream 206806 38281437 ~ 38283517 (-) True G74052
TU92567 lncRNA upstream 15252 38506192 ~ 38575968 (-) True G74137
TU92594 lncRNA upstream 149225 38640165 ~ 38644538 (-) False G74160
TU92593 lncRNA upstream 149736 38640676 ~ 38644538 (-) True G74160
TU92608 lncRNA upstream 157982 38648922 ~ 38649290 (-) True G74167
TU92615 lncRNA upstream 171198 38662138 ~ 38662455 (-) True G74174
AMCG00014889 mRNA downstream 66482 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014888 mRNA downstream 87529 38363902 ~ 38402794 (-) True AMCG00014888
AMCG00014886 mRNA downstream 150960 38330131 ~ 38339363 (-) True AMCG00014886
AMCG00014885 mRNA downstream 173306 38303052 ~ 38317017 (-) True AMCG00014885
AMCG00014883 mRNA downstream 226839 38261530 ~ 38263484 (-) True AMCG00014883
AMCG00014894 mRNA upstream 109481 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014895 mRNA upstream 185469 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014897 mRNA upstream 238049 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014902 mRNA upstream 647883 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014901 mRNA upstream 714107 39205047 ~ 39217098 (-) True AMCG00014901
TU92542 other downstream 57448 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 77092 38412160 ~ 38413231 (-) True G74107
TU92499 other downstream 140032 38343322 ~ 38350291 (-) False G74087
TU92296 other downstream 706748 37779333 ~ 37783575 (-) True G73916
TU92209 other downstream 1165016 37325020 ~ 37325307 (-) True G73833
TU92596 other upstream 106428 38597368 ~ 38644538 (-) False G74160
TU92703 other upstream 407155 38898095 ~ 38920353 (-) True G74247
TU92854 other upstream 767122 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 1146959 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 1410530 39901470 ~ 39983396 (-) True G74569

Expression Profile