RNA id: AMCG00014897


Basic Information

Item Value
RNA id AMCG00014897
length 975
RNA type mRNA
GC content 0.56
exon number 6
gene id AMCG00014897
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38728989 ~ 38836352 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAGGGGAAAGAGTGGGACAGAGATGggaaatgagaaaaagaaagtggCAGAGATAAAGCATGAGAGGGACACAGTAAACAATAAGAGTGCAGAGTGGGGAGAAATAGAAGGAGAGGAGAAAGACGAAGTGGCGAGACCTCCGGGTCGGCGTGCTGCGTTCACCTTCCTTAAACACCGAGGCCTGGGGCCCTCCGGTAGCGACCGCGTGGCTTTAACGGAGAAGACCAGGTCGGGGAGTGGTGAGCAGCCCGGCCGCCCTACTAGCGGAGCAGCCGAAGTGGCAGAGGAGGCGAGAAGAGGGGCTGCGGGGGAGGCTGTTGAAGAGAGTGAGGGTCTGGAGGTCCAGGTACAGGAGAGTGTGGGCGCTGAGAGGACTTCTGACCGCGGCGGTACCGTGCCGACTGTGGAGGTCCCAGGTGTTAACGTTGTGTCAGCTAATGTTTGTGGAGCATCAGACAGTATGGATGACAGCCGTTTAACTGGACTGGATGGCAGTATACAGCAGCAGGACGGGGCATCAGGTAGTGGAGTGGGGGTGAGCAGCGAGAGGGCTGGTGACCAGACTGAAAAGATGGAGACTGTGAAGACAACACTGAGCAGTGTGTGGGACACGGGAATGAAAGTGGGGACGGATCCTGGTCAGGACAGCAGGGTTTTTAAAGTGCCTGGGAAGAAACGCACTCGCAAATCTGAGGACGGTGCTTCTGCTAAAAAACGGAGTCCTGCTCCTGAGCCAGATGAGGCAGTGTGCTCCCAGCTGGGCTCAGATCCCCGTATTCCGTGGAGTGTGCAGGCGCCTATTGAACACCACGTGTCTCTGTCCAGCAGTGGGAGAGAACCATATAGCCCTGACGACCAGCTGAGGTTTGTTCACCTACAAAACAAGATGAAAGCCACCCTGATCACGACTATCATCGGCGTTGTGCTTTTCGCCGAAATTAGTCCGGAGAAACTGCTGCATCTCCTGAAGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92615 lncRNA downstream 66534 38662138 ~ 38662455 (-) True G74174
TU92608 lncRNA downstream 79699 38648922 ~ 38649290 (-) True G74167
TU92594 lncRNA downstream 84451 38640165 ~ 38644538 (-) False G74160
TU92593 lncRNA downstream 84451 38640676 ~ 38644538 (-) True G74160
TU92567 lncRNA downstream 153021 38506192 ~ 38575968 (-) True G74137
TU92683 lncRNA upstream 543 38836895 ~ 38837139 (-) True G74232
TU92693 lncRNA upstream 31209 38867561 ~ 38867926 (-) True G74239
TU92735 lncRNA upstream 166270 39002622 ~ 39042048 (-) True G74277
TU92771 lncRNA upstream 346014 39182366 ~ 39182634 (-) True G74307
TU92846 lncRNA upstream 395952 39232304 ~ 39238764 (-) True G74368
AMCG00014895 mRNA downstream 40928 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 99789 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014891 mRNA downstream 236035 38488619 ~ 38492954 (-) True AMCG00014891
AMCG00014889 mRNA downstream 305148 38415402 ~ 38423841 (-) True AMCG00014889
AMCG00014888 mRNA downstream 326195 38363902 ~ 38402794 (-) True AMCG00014888
AMCG00014902 mRNA upstream 302471 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014901 mRNA upstream 368695 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014903 mRNA upstream 426789 39263141 ~ 39270244 (-) True AMCG00014903
AMCG00014905 mRNA upstream 445802 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 542092 39378444 ~ 39379116 (-) False AMCG00014906
TU92596 other downstream 84451 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 238049 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 296114 38432263 ~ 38432875 (-) True G74115
TU92533 other downstream 315758 38412160 ~ 38413231 (-) True G74107
TU92499 other downstream 378698 38343322 ~ 38350291 (-) False G74087
TU92703 other upstream 61743 38898095 ~ 38920353 (-) True G74247
TU92854 other upstream 421710 39258062 ~ 39260360 (-) True G74375
TU92969 other upstream 801547 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 1065118 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 1098541 39934893 ~ 40012081 (-) True G74593

Expression Profile