RNA id: AMCG00014898



Basic Information


Item Value
RNA id AMCG00014898
length 756
RNA type mRNA
GC content 0.55
exon number 2
gene id AMCG00014898
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38961953 ~ 38968022 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgaaaaaacaaaaggaacttGATCCAACAGTGCAGCTGGTAGAACTCAAGAAGCTATGTGACACTCCCTGGGCATGCCAGTATAATTCAATCTGGGCAGTCAAGAAAACTCTACCAGCAATCCGGGCTACCCTGCGTGACATCATCGGCCAGTCAAACCCGCACCAGAAGATGCTTGAAGACCATTATGGTCCTGGGATATCTGTCTCTTTAGTTTTACTTCTGGACCGATGGGATGAAGTGCTTCAATTGCGGGACCGAGGCTCATATTGTGAGGCATTGCCCCGAGCAGCGGGAGAGACCCGAGCAGGGGGAAACGGCGGCTGCAGGGCCGAACACTGCGCCCCCCGGGGAGGTGGAGAAGCTGTTGAACAGGCAagggtggaggaggaagagcagggaGGAGGTGAGACTCAGGGAGGTATGGCGGGGGATGTGGAGGAGCAGTTGGATCCCAGTGTGGGAGATGAGGTGGTACAGAGGGtggaggagcagcaggagaAGGTGATAGTTCAGGTACATGAGAGCATTTCAGAGGACATGGAGGGATCGCAGCCTGAGGTGCTGTTTAATAGACCACTGGGATTGAAAAGGACACGGAAGGCTGAGGACAGGGCTACAGTTAAAAAGTGCAGCATGGAGGGAGTGGGGCAGGCTCTGGGGGGAGGTTTACTGCCGAGCAGTGCGCCTCTGACAGTGACGGAGAGGGGGGCTGATGGACTCCTCTGTCGCCTTGTGCGGGAATCAGGAGTTTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92701 lncRNA upstream 20194 38919805 ~ 38941759 (+) True G74246
TU92687 lncRNA upstream 96245 38863413 ~ 38865708 (+) True G74234
TU92677 lncRNA upstream 151320 38809928 ~ 38810633 (+) True G74226
TU92676 lncRNA upstream 154031 38807670 ~ 38807922 (+) True G74225
TU92673 lncRNA upstream 173680 38787961 ~ 38788273 (+) True G74222
TU92770 lncRNA downstream 214257 39182279 ~ 39182634 (+) True G74306
TU92795 lncRNA downstream 308218 39276240 ~ 39276838 (+) True G74329
TU92796 lncRNA downstream 311214 39279236 ~ 39279968 (+) True G74330
TU92799 lncRNA downstream 317272 39285294 ~ 39285804 (+) True G74333
TU92804 lncRNA downstream 337558 39305580 ~ 39305974 (+) True G74338
AMCG00014896 mRNA upstream 177781 38783395 ~ 38784172 (+) True AMCG00014896
AMCG00014893 mRNA upstream 315011 38643054 ~ 38646942 (+) True AMCG00014893
AMCG00014892 mRNA upstream 319436 38629121 ~ 38642517 (+) True AMCG00014892
AMCG00014890 mRNA upstream 389048 38553972 ~ 38572905 (+) True AMCG00014890
AMCG00014887 mRNA upstream 495726 38458369 ~ 38466227 (+) True AMCG00014887
AMCG00014899 mRNA downstream 259905 39227927 ~ 39233005 (+) True AMCG00014899
AMCG00014900 mRNA downstream 269602 39237624 ~ 39260277 (+) True AMCG00014900
AMCG00014904 mRNA downstream 413079 39381101 ~ 39389687 (+) True AMCG00014904
AMCG00014908 mRNA downstream 543750 39511772 ~ 39529811 (+) True AMCG00014908
AMCG00014907 mRNA downstream 597711 39565733 ~ 39575588 (+) True AMCG00014907
TU92678 other upstream 150825 38810693 ~ 38811128 (+) True G74227
TU92541 other upstream 529092 38432374 ~ 38432861 (+) True G74114
TU92227 other upstream 1443547 37518108 ~ 37518406 (+) True G73850
TU91690 other upstream 3567304 35390634 ~ 35394649 (+) False AMCG00014836
TU91622 other upstream 4001506 34942011 ~ 34960447 (+) True G73343
TU92814 other downstream 368246 39336268 ~ 39475819 (+) True G74348
TU92948 other downstream 638865 39606887 ~ 39621186 (+) True AMCG00014913
TU93044 other downstream 897060 39865082 ~ 39872003 (+) False AMCG00014923
TU93045 other downstream 897598 39865620 ~ 39872003 (+) False AMCG00014923
TU93040 other downstream 905118 39873140 ~ 39875428 (+) True AMCG00014923

Expression Profile