RNA id: AMCG00014903


Basic Information

Item Value
RNA id AMCG00014903
length 861
RNA type mRNA
GC content 0.56
exon number 6
gene id AMCG00014903
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39263141 ~ 39270244 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGAATGTGAGGGACGAAGATGAGGAGGAAAGTGATTCAGAAGGAGGGACAGAAGCAGGGAGTGATGAGGAAGAGACAGATGAGGACAGGGAGGTGGCTGGTCCTGCTGCAGTTCCAGCCGGACCACATGACCTGCTGGAAAAGTCACGAGTGATCAGCCAGGCAAAGGATGAGCGCACGTTCCACATTTTCTACTACATGCTGGCTGGAGCCGAGGACGAACTACgctcggAGCTGTTCCTGGAGCATTACAGTGACTACCGCTTCCTTTCCAGTGGCAGCGTGACGATCCCGGGCCAGCAGGACAGGGAGCTGTTCCTGGAGACCATGGATGCCATGAAAGTCATGGGTATCTCAGAGGATGAGCAGATTGggcTGTTGAAAGTGTTGTCTGCTGTGCTCCAGCTGGGCAACATTAAGTTCATGAAGAGGCGTGACTCTGACCAGGCCTACATGCCTGACGACACAGccGCTCAGAAGGTGTGCCACCTGATGGGCATGAATGTGACGGACTTCACCCATGCCATCCTGTGCCCCCGCATCAAGGTGGGCCAGCAGTACATCCCAAAGACACAGACCAAGGAGCAGGCAGAATTTGCGGTGGAGGCGCTGGCTACAGCCACATACAAGCAGGTGATCCGCTGGCTGGTCACGCACATCAACAAGATGCTGGACATGACCAAGCGACAGGGCGCCTCCTTCATCGGCATCCTGGACATCGCCGGCTTCGAGATCTTTGAGACCACTGACCGCTCCTTCGTGGATAAAGTCATCCAGCAGCAGGGCAGCCACCCCAAGTTCTTCCAGCCCAAGAAACTGAAGGACAAGGCTGACTTCAGTATCAGCCACTACGCTGGCAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU92855 lncRNA downstream 2781 39258530 ~ 39260360 (-) False G74375
TU92846 lncRNA downstream 24377 39232304 ~ 39238764 (-) True G74368
TU92771 lncRNA downstream 80507 39182366 ~ 39182634 (-) True G74307
TU92735 lncRNA downstream 221093 39002622 ~ 39042048 (-) True G74277
TU92693 lncRNA downstream 395215 38867561 ~ 38867926 (-) True G74239
TU92839 lncRNA upstream 23707 39293951 ~ 39295579 (-) False G74367
TU92844 lncRNA upstream 23707 39293951 ~ 39299385 (-) False G74367
TU92845 lncRNA upstream 23707 39293951 ~ 39299385 (-) True G74367
TU92843 lncRNA upstream 26748 39296992 ~ 39299385 (-) False G74367
TU92864 lncRNA upstream 31680 39301924 ~ 39302208 (-) True G74384
AMCG00014901 mRNA downstream 46043 39205047 ~ 39217098 (-) True AMCG00014901
AMCG00014902 mRNA downstream 86480 39138823 ~ 39176661 (-) True AMCG00014902
AMCG00014897 mRNA downstream 426789 38728989 ~ 38836352 (-) True AMCG00014897
AMCG00014895 mRNA downstream 575080 38676409 ~ 38688061 (-) True AMCG00014895
AMCG00014894 mRNA downstream 633941 38600421 ~ 38629200 (-) True AMCG00014894
AMCG00014905 mRNA upstream 11910 39282154 ~ 39285347 (-) True AMCG00014905
AMCG00014906 mRNA upstream 108200 39378444 ~ 39379116 (-) False AMCG00014906
AMCG00014910 mRNA upstream 261082 39531326 ~ 39536843 (-) True AMCG00014910
AMCG00014914 mRNA upstream 320314 39590558 ~ 39591658 (-) True AMCG00014914
AMCG00014915 mRNA upstream 322370 39592614 ~ 39599496 (-) True AMCG00014915
TU92854 other downstream 2781 39258062 ~ 39260360 (-) True G74375
TU92703 other downstream 342788 38898095 ~ 38920353 (-) True G74247
TU92596 other downstream 618603 38597368 ~ 38644538 (-) False G74160
TU92559 other downstream 772201 38490323 ~ 38490940 (-) False AMCG00014891
TU92542 other downstream 830266 38432263 ~ 38432875 (-) True G74115
TU92969 other upstream 367655 39637899 ~ 39638957 (-) True G74477
TU93111 other upstream 631226 39901470 ~ 39983396 (-) True G74569
TU93148 other upstream 664649 39934893 ~ 40012081 (-) True G74593
TU93146 other upstream 674486 39944730 ~ 39951070 (-) True G74591
TU93152 other upstream 714450 39984694 ~ 40012081 (-) False G74593

Expression Profile